You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I have an Apple M1 Pro and successfully created an anaconda environment and installed monailabel and the pathology app. However, when I download QuPath 0.5.0 and then place the .jar file in the running instance I get the following error:
11:53:19.708 [JavaFX Application Thread] ERROR qupath.lib.gui.ExtensionManager Error loading extension qupath.lib.extension.monailabel.Extension@52ad2a2b: qupath/lib/gui/ActionTools java.lang.NoClassDefFoundError: qupath/lib/gui/ActionTools
at qupath.lib.extension.monailabel.Extension.installExtension(Extension.java:57)
at qupath.lib.gui.ExtensionManager.refreshExtensions(ExtensionManager.java:148)
at qupath.lib.gui.ExtensionManager.promptToCopyFilesToExtensionsDirectory(ExtensionManager.java:261)
at qupath.lib.gui.viewer.DragDropImportListener.handleFileDropImpl(DragDropImportListener.java:334)
at qupath.lib.gui.viewer.DragDropImportListener.handleFileDrop(DragDropImportListener.java:286)
at qupath.lib.gui.viewer.DragDropImportListener.lambda$handle$0(DragDropImportListener.java:196)
at com.sun.javafx.application.PlatformImpl.lambda$runLater$10(PlatformImpl.java:456)
at java.base/java.security.AccessController.doPrivileged(Unknown Source)
at com.sun.javafx.application.PlatformImpl.lambda$runLater$11(PlatformImpl.java:455)
at com.sun.glass.ui.InvokeLaterDispatcher$Future.run(InvokeLaterDispatcher.java:95)
Caused by: java.lang.ClassNotFoundException: qupath.lib.gui.ActionTools
at java.base/java.net.URLClassLoader.findClass(Unknown Source)
at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
... 10 more
Any insight into how to address this?
The text was updated successfully, but these errors were encountered:
Thank you @SachidanandAlle! The tutorial said one can use qupath 0.5.0 or below so I was using 0.5.0. However, when I switched down to 0.4.4 it worked.
possibly the document/tutorial is wrong. needs to mention explicitly.
need some help from somebody who knows qupath/community to migrate to latest version. there are lots of breaking changes in the latest qupath 5.x+ version for plugin development.
I am following the following tutorial: https://github.com/Project-MONAI/tutorials/blob/main/monailabel/monailabel_pathology_nuclei_segmentation_QuPath.ipynb
I have an Apple M1 Pro and successfully created an anaconda environment and installed monailabel and the pathology app. However, when I download QuPath 0.5.0 and then place the .jar file in the running instance I get the following error:
11:53:19.708 [JavaFX Application Thread] ERROR qupath.lib.gui.ExtensionManager Error loading extension qupath.lib.extension.monailabel.Extension@52ad2a2b: qupath/lib/gui/ActionTools java.lang.NoClassDefFoundError: qupath/lib/gui/ActionTools
at qupath.lib.extension.monailabel.Extension.installExtension(Extension.java:57)
at qupath.lib.gui.ExtensionManager.refreshExtensions(ExtensionManager.java:148)
at qupath.lib.gui.ExtensionManager.promptToCopyFilesToExtensionsDirectory(ExtensionManager.java:261)
at qupath.lib.gui.viewer.DragDropImportListener.handleFileDropImpl(DragDropImportListener.java:334)
at qupath.lib.gui.viewer.DragDropImportListener.handleFileDrop(DragDropImportListener.java:286)
at qupath.lib.gui.viewer.DragDropImportListener.lambda$handle$0(DragDropImportListener.java:196)
at com.sun.javafx.application.PlatformImpl.lambda$runLater$10(PlatformImpl.java:456)
at java.base/java.security.AccessController.doPrivileged(Unknown Source)
at com.sun.javafx.application.PlatformImpl.lambda$runLater$11(PlatformImpl.java:455)
at com.sun.glass.ui.InvokeLaterDispatcher$Future.run(InvokeLaterDispatcher.java:95)
Caused by: java.lang.ClassNotFoundException: qupath.lib.gui.ActionTools
at java.base/java.net.URLClassLoader.findClass(Unknown Source)
at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
... 10 more
Any insight into how to address this?
The text was updated successfully, but these errors were encountered: