Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

waveica: accept tables with additional columns #602

Open
hechth opened this issue Oct 29, 2024 · 0 comments
Open

waveica: accept tables with additional columns #602

hechth opened this issue Oct 29, 2024 · 0 comments

Comments

@hechth
Copy link
Member

hechth commented Oct 29, 2024

Currently the tool is failing when additional columns are present, at least this is what seems to be the error. When running the tool on Galaxy with a metadata table that has additional columns, I get the following error:

Error in modwt(data_temp, wf = wf, n.levels = level) : 
  NA/NaN/Inf in foreign function call (arg 1)
Calls: waveica_singlebatch -> <Anonymous> -> wt_decomposition -> modwt
In addition: Warning messages:
1: In verify_column_types(data, required_columns) :
  NAs introduced by coercion
2: In verify_column_types(data, required_columns) :
  NAs introduced by coercion
Execution halted

When using rcx-tk and cutting only the required columns from the table, the tool works fine.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant