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Pytorch 1.10.1
Support both CUDA and CPU, you can install pytorch 1.10.1 with the following command (more information can be found in the link: https://pytorch.org/get-started/previous-versions/):
#Linux and Windows # CUDA 10.2 conda install pytorch==1.10.1 torchvision==0.11.2 torchaudio==0.10.1 cudatoolkit=10.2 -c pytorch # CUDA 11.3 conda install pytorch==1.10.1 torchvision==0.11.2 torchaudio==0.10.1 cudatoolkit=11.3 -c pytorch -c conda-forge # CPU Only conda install pytorch==1.10.1 torchvision==0.11.2 torchaudio==0.10.1 cpuonly -c pytorch
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SimpleITK 2.2.0
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numpy 22.2.2
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Reg_Main.py is the main tool to first predict the transformations between pairwise images, followed by deforming the source image by a geodesic shooting algorithm; ***Note the provided pre-trained registration model ('PretrainedReg.tar') is on 3D brain images with the size of
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Reg_Tools.py includes some utility functions;
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uEpdiff.py is the main code of forward shooting by FLASH;