Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[WIP] Dark proteome #40

Open
wants to merge 10 commits into
base: master
Choose a base branch
from
Open

[WIP] Dark proteome #40

wants to merge 10 commits into from

Conversation

gtauriello
Copy link
Contributor

Efforts by @vprobon related to #15 (see also #15 (comment)).

Scripts were moved to "DARK" branch in the given fork where people can push changes for this.

Compositionally biased regions detected by the CAST algorithm (Promponas et al., 2000). CAST v2.2 (Ioannides et al., in preparation) tab-separated output, reformatted to be inline with the Swiss-Model annotation format. Regions are colored according to amino acid type, following the Rasmol color scheme as described in http://life.nthu.edu.tw/~fmhsu/rasframe/SHAPELY.HTM.
@gtauriello gtauriello linked an issue Apr 11, 2020 that may be closed by this pull request
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Annotation of "dark" proteome part
2 participants