Skip to content

Design of EERA model outputs to pipeline #748

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
peter-t-fox opened this issue Aug 26, 2020 · 3 comments
Open

Design of EERA model outputs to pipeline #748

peter-t-fox opened this issue Aug 26, 2020 · 3 comments
Assignees

Comments

@peter-t-fox
Copy link

peter-t-fox commented Aug 26, 2020

Pseudo-code for writing the model outputs to the pipeline in both inference and prediction modes.

write_table("original/inference/2020-08-29_10_11_00", "log", log_table);
for step in 0:nsteps
  write_table("eera_outputs/original/inference/2020-08-29_10_11_00", "steps/step/ends", ends_step_n);
  write_table("eera_outputs/original/inference", "steps/step/simu", simu_step_n);
  write_table("eera_outputs/original/inference", "steps/step/particles", particles_step_n);
ends

write_table("original/prediction/2020-08-29_10_11_00", "log", log_table);
write_table("eera_outputs/original/prediction", "full", full);
write_table("eera_outputs/original/prediction", "simu", simu);
@github-actions
Copy link

Heads up @thibaud-porphyre @peter-t-fox - the "Covid19_EERAModel" label was applied to this issue.

@peter-t-fox peter-t-fox changed the title EERA model outputs to pipeline Design of EERA model outputs to pipeline Aug 27, 2020
@andyb96247 andyb96247 self-assigned this Sep 3, 2020
@andyb96247
Copy link

Have implemented code to write to the data pipeline using the above format.

@andyb96247
Copy link

Additional documentation has been added to the README file. The upload process is described, but is likely incomplete as I have not completed a successful upload so far - the files have been placed on the ftp server, but something fails towards the end of the upload script run.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants