wip

Author: acharneski

.idea/Science.iml

@@ -8,6 +8,10 @@ gem "jekyll-seo-tag", "~> 2.6"
 gem 'html-proofer', group: :test
 gem "jekyll-paginate", "~> 1.1.0"
 gem "jekyll-relative-links"
+gem "jekyll-archives"
+gem "jekyll-toc"
+gem "jekyll-last-modified-at"
+gem "faraday-retry"
 
 # Windows and JRuby does not include zoneinfo files, so bundle the tzinfo-data gem
 # and associated library.

Gemfile

@@ -58,6 +58,8 @@ GEM
       logger
     faraday-net_http (3.4.1)
       net-http (>= 0.5.0)
+    faraday-retry (2.3.2)
+      faraday (~> 2.0)
     ffi (1.17.2-aarch64-linux-gnu)
     ffi (1.17.2-aarch64-linux-musl)
     ffi (1.17.2-arm-linux-gnu)
@@ -156,6 +158,8 @@ GEM
       rouge (>= 1.7, < 4)
       safe_yaml (~> 1.0)
       webrick (>= 1.0)
+    jekyll-archives (2.3.0)
+      jekyll (>= 3.6, < 5.0)
     jekyll-avatar (0.8.0)
       jekyll (>= 3.0, < 5.0)
     jekyll-coffeescript (1.2.2)
@@ -179,6 +183,8 @@ GEM
       octokit (>= 4, < 7, != 4.4.0)
     jekyll-include-cache (0.2.1)
       jekyll (>= 3.7, < 5.0)
+    jekyll-last-modified-at (1.3.2)
+      jekyll (>= 3.7, < 5.0)
     jekyll-mentions (1.6.0)
       html-pipeline (~> 2.3)
       jekyll (>= 3.7, < 5.0)
@@ -245,6 +251,9 @@ GEM
       jekyll-seo-tag (~> 2.0)
     jekyll-titles-from-headings (0.5.3)
       jekyll (>= 3.3, < 5.0)
+    jekyll-toc (0.19.0)
+      jekyll (>= 3.9)
+      nokogiri (~> 1.12)
     jekyll-watch (2.2.1)
       listen (~> 3.0)
     jemoji (0.13.0)
@@ -344,13 +353,17 @@ PLATFORMS
   x86_64-linux-musl
 
 DEPENDENCIES
+  faraday-retry
   github-pages
   html-proofer
+  jekyll-archives
   jekyll-feed (~> 0.12)
+  jekyll-last-modified-at
   jekyll-paginate (~> 1.1.0)
   jekyll-relative-links
   jekyll-seo-tag (~> 2.6)
   jekyll-sitemap (~> 1.4)
+  jekyll-toc
   tzinfo (~> 1.2)
   tzinfo-data
   wdm (~> 0.1.1)

Gemfile.lock

@@ -13,6 +13,7 @@ url: "https://simiacryptus.github.io"
 lang: en
 markdown: kramdown
 theme: minima
+mathjax: true
 highlighter: rouge
 exclude:
   - Gemfile
@@ -56,6 +57,7 @@ defaults:
     values:
       layout: "post"
       author: "Simiacryptus Consulting"
+      mathjax: true
       collaboration_type: "recursive_dialogue"
       status: "living"
       evolution_stage: "growing"
@@ -75,6 +77,7 @@ defaults:
     values:
       layout: "post"
       category: "Consciousness & Self-Architecture"
+      mathjax: true
       collaboration_type: "framework_development"
       difficulty_level: "intermediate"
       has_mathematics: true
@@ -95,6 +98,7 @@ defaults:
     values:
       layout: "post"
       category: "AI Research & Cognitive Evolution"
+      mathjax: true
       collaboration_type: "framework_development"
       difficulty_level: "advanced"
       has_mathematics: true
@@ -129,9 +133,15 @@ defaults:
       type: "projects"
     values:
       layout: "post"
-      category: "Projects & Implementations"
+      mathjax: true
       difficulty_level: "intermediate"
       has_code: true
+      category: "Projects & Implementations"
+  - scope:
+      path: ""
+    values:
+      mathjax: true
+
 # Pagination configuration (consolidated)
 paginate: 10
 paginate_path: "/blog/page:num/"
@@ -183,7 +193,13 @@ experimental:
 # Plugin configurations
 kramdown:
   input: GFM
+  math_engine: mathjax
+  parse_block_html: true
+  parse_span_html: true
   syntax_highlighter: rouge
+  math_engine_opts:
+    preview: true
+    preview_as_code: false
   syntax_highlighter_opts:
     css_class: 'highlight'
     span:

_config.yml

@@ -97,105 +97,3 @@
     });
 </script>
 
-<style>
-    .dynamic-nav {
-        background: var(--bg-secondary, #1f2937);
-        border-bottom: 2px solid var(--primary-color, #818cf8);
-        position: relative;
-    }
-
-    .nav-container {
-        display: flex;
-        align-items: center;
-        justify-content: space-between;
-        padding: 0 1rem;
-        max-width: 1200px;
-        margin: 0 auto;
-    }
-
-    .nav-toggle {
-        display: none;
-        background: none;
-        border: none;
-        color: var(--primary-color, #818cf8);
-        font-size: 1.5rem;
-        cursor: pointer;
-        padding: 0.5rem;
-    }
-
-    .nav-menu {
-        display: flex;
-        list-style: none;
-        margin: 0;
-        padding: 0;
-        gap: 1rem;
-    }
-
-    .nav-item {
-        margin: 0;
-    }
-
-    .nav-link {
-        display: block;
-        padding: 1rem;
-        color: var(--text-color, #e5e7eb);
-        text-decoration: none;
-        transition: all 0.3s ease;
-        border-bottom: 2px solid transparent;
-    }
-
-    .nav-link:hover,
-    .nav-link.active {
-        color: var(--primary-color, #818cf8);
-        border-bottom-color: var(--primary-color, #818cf8);
-        text-shadow: 0 0 10px var(--primary-color, #818cf8);
-    }
-
-    .search-toggle {
-        background: none;
-        border: 2px solid var(--primary-color, #818cf8);
-        color: var(--primary-color, #818cf8);
-        padding: 0.5rem;
-        border-radius: 4px;
-        cursor: pointer;
-        transition: all 0.3s ease;
-    }
-
-    .search-toggle:hover {
-        background: var(--primary-color, #818cf8);
-        color: var(--bg-primary, #111827);
-    }
-
-    /* Mobile styles */
-    @media (max-width: 768px) {
-        .nav-toggle {
-            display: block;
-        }
-
-        .nav-menu {
-            position: absolute;
-            top: 100%;
-            left: 0;
-            right: 0;
-            background: var(--bg-secondary, #1f2937);
-            flex-direction: column;
-            gap: 0;
-            transform: translateY(-100%);
-            opacity: 0;
-            visibility: hidden;
-            transition: all 0.3s ease;
-            border-top: 1px solid var(--primary-color, #818cf8);
-        }
-
-        .nav-menu.active {
-            transform: translateY(0);
-            opacity: 1;
-            visibility: visible;
-        }
-
-        .nav-link {
-            padding: 1rem 1.5rem;
-            border-bottom: 1px solid rgba(129, 140, 248, 0.2);
-        }
-    }
-</style>

_includes/dynamic_nav.html

@@ -51,103 +51,3 @@
     </figcaption>
   {% endif %}
 </figure>
-<style>
-.enhanced-image {
-  margin: 2rem 0;
-  text-align: center;
-  position: relative;
-}
-.image-container {
-  position: relative;
-  display: inline-block;
-  max-width: 100%;
-  border: 2px solid var(--primary-color, #818cf8);
-  border-radius: var(--border-radius, 8px);
-  overflow: hidden;
-  box-shadow: 0 4px 20px rgba(0, 0, 0, 0.3);
-  transition: all 0.3s ease;
-}
-.image-container:hover {
-  box-shadow: 0 0 var(--glow-medium, 15px) var(--primary-color, #818cf8);
-  transform: translateY(-2px);
-}
-.responsive-image,
-.standard-image {
-  width: 100%;
-  height: auto;
-  display: block;
-  transition: transform 0.3s ease;
-}
-.image-container:hover .responsive-image,
-.image-container:hover .standard-image {
-  transform: scale(1.02);
-}
-.image-overlay {
-  position: absolute;
-  top: 0;
-  left: 0;
-  right: 0;
-  bottom: 0;
-  background: rgba(0, 0, 0, 0.7);
-  color: white;
-  display: flex;
-  align-items: center;
-  justify-content: center;
-  opacity: 0;
-  transition: opacity 0.3s ease;
-  padding: 1rem;
-  text-align: center;
-}
-.image-container:hover .image-overlay {
-  opacity: 1;
-}
-.image-zoom-btn {
-  position: absolute;
-  top: 10px;
-  right: 10px;
-  background: rgba(0, 0, 0, 0.7);
-  color: white;
-  border: none;
-  border-radius: 50%;
-  width: 40px;
-  height: 40px;
-  cursor: pointer;
-  font-size: 1.2rem;
-  opacity: 0;
-  transition: opacity 0.3s ease;
-}
-.image-container:hover .image-zoom-btn {
-  opacity: 1;
-}
-.image-zoom-btn:hover {
-  background: var(--primary-color, #818cf8);
-}
-.image-caption {
-  margin-top: 1rem;
-  font-style: italic;
-  color: var(--tertiary-color, #9ca3af);
-  font-size: 0.9rem;
-  line-height: 1.4;
-}
-.image-caption p {
-  margin: 0;
-}
-.image-link {
-  text-decoration: none;
-  display: inline-block;
-}
-/* Responsive adjustments */
-@media (max-width: 768px) {
-  .enhanced-image {
-    margin: 1rem 0;
-  }
-  .image-zoom-btn {
-    width: 35px;
-    height: 35px;
-    font-size: 1rem;
-  }
-  .image-caption {
-    font-size: 0.8rem;
-  }
-}
-</style>