DESCRIPTION

Package: celldex
Title: Index of Reference Cell Type Datasets
Version: 1.13.3
Date: 2024-04-25
Authors@R: c(person("Dvir", "Aran", email="dvir.aran@ucsf.edu", role=c("aut")),
    person("Aaron", "Lun", email="infinite.monkeys.with.keyboards@gmail.com", role=c("aut", "cre", "cph")),
    person("Daniel", "Bunis", role="aut"),
    person("Jared", "Andrews", email = "jared.andrews07@gmail.com", role="aut"),
    person("Friederike", "Dündar", email = "frd2007@med.cornell.edu", role="aut"))
Description: 
    Provides a collection of reference expression datasets with curated cell
    type labels, for use in procedures like automated annotation of single-cell
    data or deconvolution of bulk RNA-seq.
License: GPL-3 
Depends: SummarizedExperiment
Imports: 
    utils,
    methods,
    Matrix, 
    ExperimentHub,
    AnnotationHub,
    AnnotationDbi,
    S4Vectors,
    DelayedArray,
    DelayedMatrixStats,
    gypsum,
    alabaster.base,
    alabaster.matrix,
    alabaster.se,
    DBI,
    RSQLite,
    jsonlite
Suggests:
    testthat,
    knitr,
    rmarkdown,
    BiocStyle,
    DT,
    jsonvalidate,
    BiocManager,
    ensembldb
biocViews: 
    ExperimentHub,
    ExperimentData, 
    ExpressionData, 
    SequencingData, 
    RNASeqData
VignetteBuilder: knitr
Encoding: UTF-8
URL: https://github.com/LTLA/celldex
BugReports: https://support.bioconductor.org/
RoxygenNote: 7.3.1