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poetry.lock
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# This file is automatically @generated by Poetry 2.0.1 and should not be changed by hand.
[[package]]
name = "airium"
version = "0.2.6"
description = "Easy and quick html builder with natural syntax correspondence (python->html). No templates needed. Serves pure pythonic library with no dependencies."
optional = false
python-versions = "*"
groups = ["main"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
files = [
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[package.extras]
dev = ["pytest (>=6.2,<7.0)", "pytest-cov (>=3.0,<4.0)", "pytest-mock (>=3.6,<4.0)"]
parse = ["beautifulsoup4 (>=4.10.0,<5.0)", "requests (>=2.12.0,<3)"]
[[package]]
name = "annotated-types"
version = "0.7.0"
description = "Reusable constraint types to use with typing.Annotated"
optional = false
python-versions = ">=3.8"
groups = ["main", "dev"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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]
[[package]]
name = "antlr4-python3-runtime"
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description = "ANTLR 4.9.3 runtime for Python 3.7"
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python-versions = "*"
groups = ["main", "dev"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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[[package]]
name = "appdirs"
version = "1.4.4"
description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
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python-versions = "*"
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name = "arrow"
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description = "Better dates & times for Python"
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groups = ["main", "dev"]
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python-dateutil = ">=2.7.0"
types-python-dateutil = ">=2.8.10"
[package.extras]
doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
[[package]]
name = "attrs"
version = "25.1.0"
description = "Classes Without Boilerplate"
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python-versions = ">=3.8"
groups = ["main", "dev"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
files = [
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benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit-uv", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
[[package]]
name = "bcp47"
version = "0.1.0"
description = "Language tags made easy"
optional = false
python-versions = "*"
groups = ["main"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
files = [
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description = "Screen-scraping library"
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python-versions = ">=3.6.0"
groups = ["main", "dev"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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soupsieve = ">1.2"
[package.extras]
cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
[[package]]
name = "bioregistry"
version = "0.11.35"
description = "Integrated registry of biological databases and nomenclatures"
optional = false
python-versions = ">=3.9"
groups = ["dev"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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curies = ">=0.7.0"
more_click = ">=0.1.2"
pydantic = "*"
pystow = ">=0.1.13"
requests = "*"
tqdm = "*"
[package.extras]
align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pandas", "pyyaml", "tabulate"]
charts = ["jinja2", "matplotlib", "matplotlib_venn", "pandas", "seaborn"]
docs = ["autodoc_pydantic", "sphinx (>=8)", "sphinx-click", "sphinx-rtd-theme (>=3.0)", "sphinx_automodapi"]
export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
gha = ["more_itertools"]
health = ["click_default_group", "jinja2", "pandas", "pyyaml", "tabulate"]
paper-ranking = ["indra", "more_itertools", "pandas", "scikit-learn", "tabulate"]
tests = ["coverage", "httpx", "indra", "more_itertools", "pytest", "scikit-learn"]
web = ["a2wsgi", "bootstrap-flask (<=2.0.0)", "curies[fastapi]", "fastapi", "flask (<2.2.4)", "markdown", "pyyaml", "rdflib", "rdflib-endpoint", "rdflib-jsonld", "uvicorn", "werkzeug (<2.3.0)"]
[[package]]
name = "bleach"
version = "6.2.0"
description = "An easy safelist-based HTML-sanitizing tool."
optional = false
python-versions = ">=3.9"
groups = ["main"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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tinycss2 = {version = ">=1.1.0,<1.5", optional = true, markers = "extra == \"css\""}
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css = ["tinycss2 (>=1.1.0,<1.5)"]
[[package]]
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description = "Composable complex class support for attrs and dataclasses."
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python-versions = ">=3.8"
groups = ["main"]
markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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exceptiongroup = {version = ">=1.1.1", markers = "python_version < \"3.11\""}
typing-extensions = {version = ">=4.1.0,<4.6.3 || >4.6.3", markers = "python_version < \"3.11\""}
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bson = ["pymongo (>=4.4.0)"]
cbor2 = ["cbor2 (>=5.4.6)"]
msgpack = ["msgpack (>=1.0.5)"]
msgspec = ["msgspec (>=0.18.5)"]
orjson = ["orjson (>=3.9.2)"]
pyyaml = ["pyyaml (>=6.0)"]
tomlkit = ["tomlkit (>=0.11.8)"]
ujson = ["ujson (>=5.7.0)"]
[[package]]
name = "certifi"
version = "2025.1.31"
description = "Python package for providing Mozilla's CA Bundle."
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python-versions = ">=3.6"
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name = "cffi"
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