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Patch un-imported Accessors in MCMCChainsExt #239

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merged 2 commits into from
Nov 18, 2024

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@sunxd3 sunxd3 commented Nov 18, 2024

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@sunxd3 sunxd3 changed the title Patch un-imported Accessors Patch un-imported Accessors in MCMCChainsExt Nov 18, 2024
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coveralls commented Nov 18, 2024

Pull Request Test Coverage Report for Build 11896841792

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage increased (+0.3%) to 74.44%

Totals Coverage Status
Change from base Build 11870001725: 0.3%
Covered Lines: 1395
Relevant Lines: 1874

💛 - Coveralls

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github-actions bot commented Nov 18, 2024

BridgeStan not found at location specified by $BRIDGESTAN environment variable, downloading version 2.5.0 to /home/runner/.bridgestan/bridgestan-2.5.0
Done!
Model dogs produces error: ErrorException("log_density() failed with exception: Exception: bernoulli_lpmf: Probability parameter is inf, but must be in the interval [0, 1] (in '/home/runner/work/JuliaBUGS.jl/JuliaBUGS.jl/benchmark/stan/bugs_examples/vol1/dogs/dogs.stan', line 37, column 6 to line 38, column 62)\n")

Model Parameter Count Data Count Stan Density Time (µs) Stan Density Gradient Time (µs) JuliaBUGS Density Time with Graph Walk (µs) JuliaBUGS Density Gradient Time with ReverseDiff.jl(compiled tape) (µs)
rats 65 150 6.29675 8.86633 65.8575 85.238
pumps 12 10 0.994966 1.28543 11.5265 6.33425
dogs 2 720 NA NA 228.666 164.907
seeds 26 21 2.46617 3.03344 29.295 19.196
surgical_realistic 14 12 1.25017 1.58874 15.539 8.476
magnesium 108 96 10.5595 12.1575 126.675 82.404
salm 22 18 2.43792 3.06456 22.011 12.824
equiv 15 20 2.58482 3.44013 19.716 16.411
dyes 9 30 0.997037 1.31423 12.183 12.9995
stacks 6 21 1.12488 1.67018 22.953 15.439
epil 303 236 33.682 39.724 294.649 242.983
blockers 47 44 3.24711 3.76843 60.3125 28.393
oxford 244 240 16.631 19.136 339.422 171.73
lsat 1006 5000 176.974 219.859 1991.3 1326.19
bones 33 422 73.166 91.13 431.448 190.475
mice 20 65 7.256 9.28067 28.924 37.941
kidney 64 58 10.6045 16.15 61.805 70.481
leuk 18 714 20.739 27.161 214.113 194.101
leukfr 40 714 24.335 32.441 242.1 232.161

@sunxd3 sunxd3 merged commit 5dedc30 into master Nov 18, 2024
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@sunxd3 sunxd3 deleted the sunxd/patch_mcmcchainsext branch November 18, 2024 17:38
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