{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":479564690,"defaultBranch":"main","name":"primed-file-checks","ownerLogin":"UW-GAC","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-04-08T23:19:08.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/25439708?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1720726852.0","currentOid":""},"activityList":{"items":[{"before":"7b336a4fba0c5c7fac212a5aa111144c7c07f42d","after":null,"ref":"refs/heads/add-submit-qc-report-rmd","pushedAt":"2024-07-11T19:40:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"}},{"before":"e12fe539841862a5c6afa10b9073563ec7bcf825","after":null,"ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-26T21:40:58.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"}},{"before":"7f53be6c2821363fde389e51989a84207ce91c2d","after":"9088b4e799c86950d01a1e3e5ea4d790e15b8b15","ref":"refs/heads/main","pushedAt":"2024-06-26T21:40:55.000Z","pushType":"pr_merge","commitsCount":10,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"Merge pull request #25 from UW-GAC/new_gsr_tables\n\nNew gsr tables","shortMessageHtmlLink":"Merge pull request #25 from UW-GAC/new_gsr_tables"}},{"before":"1238e9d9e29e6ebab8d660f63dba87d23c4fa43d","after":"e12fe539841862a5c6afa10b9073563ec7bcf825","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-25T21:07:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"fix DD table name","shortMessageHtmlLink":"fix DD table name"}},{"before":"7b24aed13495f73046ee8883b18ff7717dfdb08e","after":"1238e9d9e29e6ebab8d660f63dba87d23c4fa43d","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-25T18:32:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"use new docker image","shortMessageHtmlLink":"use new docker image"}},{"before":"04fdc5c70f6a3316df6514325e562e9c42f52aa0","after":"7b24aed13495f73046ee8883b18ff7717dfdb08e","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-25T04:30:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"add runtime","shortMessageHtmlLink":"add runtime"}},{"before":"988459b8669e470bf7fb870a025fdf9c3d9c2c5d","after":"04fdc5c70f6a3316df6514325e562e9c42f52aa0","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-25T00:10:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"scatter over pairs of analysis and file tables\n\ntable paths will be in a glob* directory, so we can't use the file\npaths directly output from the validate task. Instead, move\nselect_gsr_files to a separate task that is inside a scatter()\nover pairs of analysis and file tables.","shortMessageHtmlLink":"scatter over pairs of analysis and file tables"}},{"before":"96b168e4602de5f7aa6a12037b6d47bdc2758bdc","after":"988459b8669e470bf7fb870a025fdf9c3d9c2c5d","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-21T23:38:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"id column names depend on type","shortMessageHtmlLink":"id column names depend on type"}},{"before":"4b71f2e1c5bb9ca383d87fc7323fb97674f13ceb","after":"96b168e4602de5f7aa6a12037b6d47bdc2758bdc","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-21T22:37:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"fix parentheses","shortMessageHtmlLink":"fix parentheses"}},{"before":"c7dd8a303f8cbc4fc39a10d5d28749f78f203b24","after":"4b71f2e1c5bb9ca383d87fc7323fb97674f13ceb","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-21T15:53:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"missing R library","shortMessageHtmlLink":"missing R library"}},{"before":"aa8717cbf431f982f73fc8642c0dcdfed95f0656","after":"c7dd8a303f8cbc4fc39a10d5d28749f78f203b24","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-21T07:08:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"new docker image","shortMessageHtmlLink":"new docker image"}},{"before":null,"after":"aa8717cbf431f982f73fc8642c0dcdfed95f0656","ref":"refs/heads/new_gsr_tables","pushedAt":"2024-06-21T06:48:55.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"smgogarten","name":"Stephanie M. Gogarten","path":"/smgogarten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2028958?s=80&v=4"},"commit":{"message":"allow multiple types of GSR analyses\n\nGSR validation now allows multiple pairs of analysis/file tables.\nNaming convention is expected to be _analysis and\n_file","shortMessageHtmlLink":"allow multiple types of GSR analyses"}},{"before":"c26567113e0efe42acdb6f50d16c64a223c2e5ba","after":null,"ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T18:03:46.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"}},{"before":"40fb6c3a9df5f4fdb4843eceff287f8d881dc5a3","after":"7f53be6c2821363fde389e51989a84207ce91c2d","ref":"refs/heads/main","pushedAt":"2024-05-29T18:03:38.000Z","pushType":"pr_merge","commitsCount":13,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Merge pull request #24 from UW-GAC/womtool-ci\n\nRun womtool on WDL files","shortMessageHtmlLink":"Merge pull request #24 from UW-GAC/womtool-ci"}},{"before":"db1c449d6bb181f957c4107bc09426622bd89fdb","after":"c26567113e0efe42acdb6f50d16c64a223c2e5ba","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T17:44:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Go back to hardcoding WDL files in CI\n\nI couldn't get the dynamic detection to work, so go back to the\nsimple method.","shortMessageHtmlLink":"Go back to hardcoding WDL files in CI"}},{"before":"f4ed263614e9f477d006cc681d0de5627cd98864","after":"db1c449d6bb181f957c4107bc09426622bd89fdb","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T17:41:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Fix output value for detect-wdl-files job","shortMessageHtmlLink":"Fix output value for detect-wdl-files job"}},{"before":"6bdfe441e4893c597cd71c7888a70ecd2629a5a8","after":"f4ed263614e9f477d006cc681d0de5627cd98864","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T17:15:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Show the correct output","shortMessageHtmlLink":"Show the correct output"}},{"before":"ac5de0a502b89fc9da2bb11545153ac17754167a","after":"6bdfe441e4893c597cd71c7888a70ecd2629a5a8","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T17:14:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Try new way of specifying matrix values in detect-wdl-files job","shortMessageHtmlLink":"Try new way of specifying matrix values in detect-wdl-files job"}},{"before":"747ed300a14a223fd43aff6b500f616b797834f0","after":"ac5de0a502b89fc9da2bb11545153ac17754167a","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T17:04:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Try detecting WDL files automatically in CI","shortMessageHtmlLink":"Try detecting WDL files automatically in CI"}},{"before":"2d5097ecc4b988a94e4ecd8f7117e4847a2fc8ab","after":"747ed300a14a223fd43aff6b500f616b797834f0","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T16:56:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Add missing comma","shortMessageHtmlLink":"Add missing comma"}},{"before":"018981221a6ea79a90e1b154f571a8efb93316d8","after":"2d5097ecc4b988a94e4ecd8f7117e4847a2fc8ab","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T16:56:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Run all womtool jobs regardless of whether one WDL fails","shortMessageHtmlLink":"Run all womtool jobs regardless of whether one WDL fails"}},{"before":"ae0e603629cbe14545138364844926242966a874","after":"018981221a6ea79a90e1b154f571a8efb93316d8","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-29T16:54:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Add all WDL files to CI","shortMessageHtmlLink":"Add all WDL files to CI"}},{"before":"092f74032ecc4f1585a2f5a0c4175eb27b4f9679","after":"ae0e603629cbe14545138364844926242966a874","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-28T23:29:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Undo intentional breaking change to gsr data model","shortMessageHtmlLink":"Undo intentional breaking change to gsr data model"}},{"before":"8e4430aa8eb1216552372a2aabd7641bf0fa94e2","after":"092f74032ecc4f1585a2f5a0c4175eb27b4f9679","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-28T23:28:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Intentionally break gsr data model to test womtool CI","shortMessageHtmlLink":"Intentionally break gsr data model to test womtool CI"}},{"before":"d0091bb4f20f9d1cdc051c104187aad240bce2ea","after":"8e4430aa8eb1216552372a2aabd7641bf0fa94e2","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-28T23:23:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Fix matrix context accessing\n\n- instead of _","shortMessageHtmlLink":"Fix matrix context accessing"}},{"before":null,"after":"d0091bb4f20f9d1cdc051c104187aad240bce2ea","ref":"refs/heads/womtool-ci","pushedAt":"2024-05-28T23:18:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Add first-pass CI to run womtool on WDL files","shortMessageHtmlLink":"Add first-pass CI to run womtool on WDL files"}},{"before":"0fdb6adc776716260caea9c466b55cb694c28526","after":"40fb6c3a9df5f4fdb4843eceff287f8d881dc5a3","ref":"refs/heads/main","pushedAt":"2024-05-21T22:03:02.000Z","pushType":"pr_merge","commitsCount":12,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Merge pull request #21 from UW-GAC/add-submit-qc-report-rmd\n\nAdd script to run QC reports for tables that don't have them yet","shortMessageHtmlLink":"Merge pull request #21 from UW-GAC/add-submit-qc-report-rmd"}},{"before":"8cd578b598df0b85558be7601f92b68c96f24101","after":"7b336a4fba0c5c7fac212a5aa111144c7c07f42d","ref":"refs/heads/add-submit-qc-report-rmd","pushedAt":"2024-05-21T00:37:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Add other output file to gitignore","shortMessageHtmlLink":"Add other output file to gitignore"}},{"before":"6ef4599300ea9fe8d28c7a3ac6c0418b98f26a7e","after":"8cd578b598df0b85558be7601f92b68c96f24101","ref":"refs/heads/add-submit-qc-report-rmd","pushedAt":"2024-05-21T00:32:17.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Add Rmd to copy qc reports and update data tables","shortMessageHtmlLink":"Add Rmd to copy qc reports and update data tables"}},{"before":"374a2e4f734ae807ea4343d168c6da93ea1ad8a3","after":"6ef4599300ea9fe8d28c7a3ac6c0418b98f26a7e","ref":"refs/heads/add-submit-qc-report-rmd","pushedAt":"2024-05-20T22:12:06.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"amstilp","name":"Adrienne Stilp","path":"/amstilp","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3944584?s=80&v=4"},"commit":{"message":"Fix printing submissions when not running with submit=TRUE","shortMessageHtmlLink":"Fix printing submissions when not running with submit=TRUE"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEfTJkAAA","startCursor":null,"endCursor":null}},"title":"Activity ยท UW-GAC/primed-file-checks"}