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setup.py
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setup.py
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from setuptools import setup, find_packages
import os
requirements = [
'cobra',
'numpy',
'scipy',
'networkx>=2.1',
'python-libsbml',
]
try:
with open('README.rst') as handle:
description = handle.read()
except:
description = ''
datadir = os.path.join('metquest','example','data')
datafiles = [(d, [os.path.join(d,f) for f in files])
for d, folders, files in os.walk(datadir)]
setup(
name='metquest',
version='0.1.31',
packages=find_packages(),
project_urls={
'Source': 'https://github.com/RamanLab/metquest'
},
install_requires=requirements,
setup_requires=[],
scripts=['bin/metquest.sh'],
author='Aarthi Ravikrishnan',
author_email='[email protected]',
description='MetQuest: Enumerating all possible biosynthetic pathways in metabolic networks ',
long_description=description,
license='LGPL/GPL v2+',
keywords='metabolism biology graph-theory pathways',
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: GNU Lesser General Public License v2'
' or later (LGPLv2+)',
'License :: OSI Approved :: GNU General Public License v2'
' or later (GPLv2+)',
'Operating System :: OS Independent',
'Programming Language :: Python :: 3.4',
'Programming Language :: Python :: 3.5',
'Programming Language :: Python :: 3.6',
'Topic :: Scientific/Engineering',
'Topic :: Scientific/Engineering :: Bio-Informatics'
],
platforms='GNU/Linux, Mac OS X >= 10.7, Microsoft Windows >= 7',
data_files = datafiles,
include_package_data = True
)