.gitignore

venv/
.vscode/
.idea/
__pycache__/
source/__pycache__/
.xml

# hide the user name/passwd from tracking
credentials.py

# hide notebook checkpoints
.ipynb_checkpoints

# exclude pyramid of the png tiles used by the viewer
viewer/data/mouse/img/default_98genes/16384px/
viewer/data/mouse/img/default/32768px/


gsf-save*.*
*.7z
*.png
viewer/img

/pciSeq/data/mouse/ca1/background_image/mouse/background_boundaries.tif
/pciSeq/data/mouse/ca1/background_image/mouse/.ipynb_checkpoints/
/pciSeq/data/mouse/ca1/background_image/mouse/background_image.tif
/pciSeq/data/mouse/ca1/background_image/mouse/CellMap.mat
/pciSeq/data/mouse/ca1/background_image/mouse/Untitled.ipynb
/pciSeq/data/mouse/ca1/background_image/mouse/Untitled1.ipynb
/pciSeq/data/mouse/ca1/segmentation/label_image.npy
/dist/
/.eggs/
/build/
/pciSeq.egg-info/