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periodic_tests.yml
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name: Periodic Tests
on:
schedule:
# every day at 1:30 AM UTC
- cron: "30 1 * * *"
workflow_dispatch:
concurrency:
group: ${{ github.workflow }}
cancel-in-progress: true
jobs:
check-manifest:
runs-on: ubuntu-22.04
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Run check-manifest
uses: pre-commit/[email protected]
with:
extra_args: check-manifest --hook-stage manual
pre-commit:
runs-on: ubuntu-22.04
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Run pre-commit
uses: pre-commit/[email protected]
with:
extra_args: --all-files
run-notebook-examples:
runs-on: ubuntu-22.04
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Use numba cache to set env variables but not restore cache
uses: ./.github/actions/numba_cache
with:
cache_name: "run-notebook-examples"
runner_os: ${{ runner.os }}
python_version: "3.10"
restore_cache: "false"
- name: Install dependencies
uses: nick-fields/retry@v3
with:
timeout_minutes: 30
max_attempts: 3
command: python -m pip install .[all_extras,binder,dev]
- name: Run example notebooks
run: build_tools/run_examples.sh false
shell: bash
- name: Save new cache
uses: actions/cache/save@v4
with:
path: ${{ github.workspace }}/.numba_cache
# Save cache with the current date (ENV set in numba_cache action)
key: numba-run-notebook-examples-${{ runner.os }}-3.10-${{ env.CURRENT_DATE }}
test-no-soft-deps:
runs-on: ubuntu-22.04
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Use numba cache to set env variables but not restore cache
uses: ./.github/actions/numba_cache
with:
cache_name: "test-no-soft-deps"
runner_os: ${{ runner.os }}
python_version: "3.10"
restore_cache: "false"
- name: Install aeon and dependencies
uses: nick-fields/retry@v3
with:
timeout_minutes: 30
max_attempts: 3
command: python -m pip install .[dev]
- name: Show dependencies
run: python -m pip list
- name: Run tests
run: python -m pytest -n logical
- name: Save new cache
uses: actions/cache/save@v4
with:
path: ${{ github.workspace }}/.numba_cache
# Save cache with the current date (ENV set in numba_cache action)
key: numba-test-no-soft-deps-${{ runner.os }}-3.10-${{ env.CURRENT_DATE }}
pytest:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-22.04, macOS-14, windows-2022 ]
python-version: [ "3.9", "3.10", "3.11", "3.12" ]
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Use numba cache to set env variables but not restore cache
uses: ./.github/actions/numba_cache
with:
cache_name: "pytest"
runner_os: ${{ runner.os }}
python_version: ${{ matrix.python-version }}
restore_cache: "false"
- name: Install aeon and dependencies
uses: nick-fields/retry@v3
with:
timeout_minutes: 30
max_attempts: 3
command: python -m pip install .[all_extras,dev]
- name: Show dependencies
run: python -m pip list
- name: Run tests
run: python -m pytest -n logical
- name: Save new cache
uses: actions/cache/save@v4
with:
path: ${{ github.workspace }}/.numba_cache
# Save cache with the current date (ENV set in numba_cache action)
key: numba-pytest-${{ runner.os }}-${{ matrix.python-version}}-${{ env.CURRENT_DATE }}
codecov:
runs-on: ubuntu-22.04
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Disable Numba JIT
run: echo "NUMBA_DISABLE_JIT=1" >> $GITHUB_ENV
- name: Install aeon and dependencies
uses: nick-fields/retry@v3
with:
timeout_minutes: 30
max_attempts: 3
command: python -m pip install .[all_extras,unstable_extras,dev]
- name: Show dependencies
run: python -m pip list
- name: Run tests
run: python -m pytest -n logical --cov=aeon --cov-report=xml --timeout 1800
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v4
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}