index.md

title	description
Metrics	AIDA Data Hub in numbers.

{% capture ignored %} {% assign totn = 0 %} {% assign totb = 0 %} {% assign tots = 0 %} {% assign tota = 0 %} {% assign annn = 0 %} {% assign annb = 0 %} {% assign anns = 0 %} {% assign anna = 0 %} {% assign patn = 0 %} {% assign patb = 0 %} {% assign pats = 0 %} {% assign pata = 0 %} {% assign radn = 0 %} {% assign radb = 0 %} {% assign rads = 0 %} {% assign rada = 0 %} {% assign stotn = 0 %} {% assign stotb = 0 %} {% assign stots = 0 %} {% assign stota = 0 %} {% assign sannn = 0 %} {% assign sannb = 0 %} {% assign sanns = 0 %} {% assign sanna = 0 %} {% assign spatn = 0 %} {% assign spatb = 0 %} {% assign spats = 0 %} {% assign spata = 0 %} {% assign sradn = 0 %} {% assign sradb = 0 %} {% assign srads = 0 %} {% assign srada = 0 %} {% assign country-codes = '' | split: '' %} {% assign modalities = '' | split: '' %} {% assign organs = '' | split: '' %}

{% for d in site.datasets %} {% if d.hidden %}{% continue %}{% endif %} {% if d.synthetic %}{% continue %}{% endif %} {% assign kw = d.datacite.keywords | split:", " %} {% assign b = d.other.bytes | default: 0 %} {% assign s = d.other.numberOfScans | default: 0 %} {% assign a = d.other.numberOfAnnotations | default: 0 %} {% assign totn = totn | plus: 1 %} {% assign totb = totb | plus: b %} {% assign tots = tots | plus: s %} {% assign tota = tota | plus: a %} {% if kw contains 'Annotated' %} {% assign annn = annn | plus: 1 %} {% assign annb = annb | plus: b %} {% assign anns = anns | plus: s %} {% assign anna = anna | plus: a %} {% endif %} {% if kw contains 'Pathology' %} {% assign patn = patn | plus: 1 %} {% assign patb = patb | plus: b %} {% assign pats = pats | plus: s %} {% assign pata = pata | plus: a %} {% endif %} {% if kw contains 'Radiology' %} {% assign radn = radn | plus: 1 %} {% assign radb = radb | plus: b %} {% assign rads = rads | plus: s %} {% assign rada = rada | plus: a %} {% endif %} {% assign country-codes = country-codes | concat: d.other.countries-shared %} {% assign modalities = modalities | concat: d.other.modality %} {% assign o = d.other.organ | map: "name" %} {% assign organs = organs | concat: o %} {% endfor %} {% for d in site.datasets %} {% if d.hidden %}{% continue %}{% endif %} {% if d.synthetic %} {% assign skw = d.datacite.keywords | split:", " %} {% assign sb = d.other.bytes | default: 0 %} {% assign ss = d.other.numberOfScans | default: 0 %} {% assign sa = d.other.numberOfAnnotations | default: 0 %} {% assign stotn = stotn | plus: 1 %} {% assign stotb = stotb | plus: sb %} {% assign stots = stots | plus: ss %} {% assign stota = stota | plus: sa %}

{% if skw contains 'Synthetic' and skw contains 'Annotated' %}
  {% assign sannn = sannn | plus: 1 %}
  {% assign sannb = sannb | plus: sb %}
  {% assign sanns = sanns | plus: ss %}
  {% assign sanna = sanna | plus: sa %}
{% endif %}
{% if skw contains 'Synthetic' and skw contains 'Pathology' %}
  {% assign sradn = sradn | plus: 1 %}
  {% assign sradb = sradb | plus: sb %}
  {% assign srads = srads | plus: ss %}
  {% assign srada = srada | plus: sa %}
{% endif %}
{% if skw contains 'Synthetic' and skw contains 'Radiology' %}
  {% assign sradn = sradn | plus: 1 %}
  {% assign sradb = sradb | plus: sb %}
  {% assign srads = srads | plus: ss %}
  {% assign srada = srada | plus: sa %}
{% endif %}
{% assign country-codes = country-codes | concat: d.other.countries-shared %}
{% assign modalities = modalities | concat: d.other.modality %}
{% assign o = d.other.organ | map: "name" %}
{% assign organs = organs | concat: o %}
{% endif %}

{% endfor %} {% assign modalities = modalities | uniq | sort %} {% assign organs = organs | uniq | sort %} {% assign countries = '' | split: '' %} {% for c in country-codes %}{% assign countries = countries | push: site.data.countrynames[c] %}{% endfor %} {% assign countries = countries | uniq | sort %} {% endcapture %}

Countries

{% include world-map.svg %}

AIDA Data Hub has facilitated legal and ethical data sharing with researchers in {{ countries | size }} countries: {{ countries | array_to_sentence_string: "and" }}.

Datasets

Clinical Datasets

	Datasets	Scans	Annotations	Size
Total	{{ totn }}	{{ tots }}	{{ tota }}	{% include human_friendly_filesize bytes=totb %}
Annotated	{{ annn }}	{{ anns }}	{{ anna }}	{% include human_friendly_filesize bytes=annb %}
Pathology	{{ patn }}	{{ pats }}	{{ pata }}	{% include human_friendly_filesize bytes=patb %}
Radiology	{{ radn }}	{{ rads }}	{{ rada }}	{% include human_friendly_filesize bytes=radb %}

Synthetic Datasets

These datasets contain synthetic data created by a generative AI model.

	Datasets	Scans	Annotations	Size
Total	{{ stotn }}	{{ stots }}	{{ stota }}	{% include human_friendly_filesize bytes=stotb %}
Annotated	{{ sannn }}	{{ sanns }}	{{ sanna }}	{% include human_friendly_filesize bytes=sannb %}
Pathology	{{ spatn }}	{{ spats }}	{{ spata }}	{% include human_friendly_filesize bytes=spatb %}
Radiology	{{ sradn }}	{{ srads }}	{{ srada }}	{% include human_friendly_filesize bytes=sradb %}

Modalities

Modalities: {{ modalities | size }}

Please click the names below to do a simple text search for matching datasets:

{% for m in modalities %}
• {{ m }}: {{ site.data.modalitynames[m] }}
{% endfor %}

Organs

Organs: {{ organs | size }} (unique names)

Please click the names below to do a simple text search for matching datasets:

{% for o in organs %}
• {{ o }}
{% endfor %}

FAIR

In 2020, EOSC-Nordic carried out an independent evaluation of FAIR readiness among 98 data repositories in the Nordics (results to be published). The AIDA Data Hub was included in this evaluation, and was shown to be among the 12% best scoring repositories in in the sample.

Draft report: An assessment of FAIR-uptake among regional digital repositories
Follow-up: EOSC-Nordic WP4 FAIR assessments result (Dec 2020).

AIDA Data Hub is also findable through re3data.org