NAMESPACE

# Generated by roxygen2: do not edit by hand
import(RcisTarget)
import(igraph)
import(psych)
import(amap)
import(stringr)
import(dplyr)
import(qgraph)
import(cluster)
import(fpc)
import(dbscan)
import(foreach)
import(circular)
import(rsvd)
import(Matrix)
import(ape)
export(plottfCorNet)
export(calculateVelocity)
export(CreateSCReguloCityObject)
export(calculateVelocity)
export(applyReguloCity)
export(filterGenes)
export(extractRegulatoryNetwork)
export(TF_link_gene_list)
export(clusterGenes)
export(plotPatterns)
export(plotClusteredPatterns)
export(readIntrexStats)
export(plotFunctionalEnrichment)
export(ac)
export(val2col)
export(normalizeAndSmoothIntrexStats)
export(plotFunctionalEnrichment)
export(randomized_pca)
export(normalization_median)
export(freeman_tukey_transform)
export(pdist)
export(smoother_aggregate_nearest_nb)
export(knn_smoothing)
export(plotTFNetwork)
export(plotTFTargets)
export(findPatterns)
export(pat)