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DESCRIPTION
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DESCRIPTION
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Package: pdindicatoR
Title: Calculate and visualize a phylogenetic diversity indicators based
on species occurence data cubes
Version: 0.0.2
Authors@R: c(
person("Lissa", "Breugelmans", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-8472-3577", affiliation = "Meise Botanic Garden")),
person("Maarten", "Trekels", , "[email protected]", role = "aut",
comment = c(ORCID = "0000-0001-8282-8765", affiliation = "Meise Botanic Garden")),
person("Louise", "Hendrickx", , "[email protected]", role = "aut",
comment = c(ORCID = "0000-0002-9317-7862", affiliation = "Meise Botanic Garden")),
person("Ward", "Langeraert", , "[email protected]", role = "ctb",
comment = c(ORCID = "0000-0002-5900-8109", affiliation = "Research Institute for Nature and Forest (INBO)")),
person("Meise Botanic Garden", , , "[email protected]", role = "cph"),
person("European Union's Horizon Europe Research and Innovation Programme (ID No 101059592)", role = "fnd")
)
Description: A package to calculate and produce a map of phylogenetic
diversity scores for each grid cell in the input species occurences
data cube, and calculate the percentage of high PD cells within
currently protected areas. You provide a phylogenetic tree, the
datacube for the corresponding species is downloaded from GBIF (or
user-uploaded), and the package does the rest.
License: MIT + file LICENSE
URL: https://github.com/b-cubed-eu/pdindicatoR,
https://b-cubed-eu.github.io/pdindicatoR/
Imports:
ape,
dplyr,
gdalUtilities,
ggplot2,
rlang,
rnaturalearth,
rnaturalearthdata,
rotl,
sf,
shiny,
stringr
Suggests:
purrr,
testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-GB
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2