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DESCRIPTION
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DESCRIPTION
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Package: apTreeshape
Date: 2018-03-22
Version: 1.5-0
Title: Analyses of Phylogenetic Treeshape
Author: Nicolas Bortolussi, Michael Blum, Eric Durand, Olivier Francois, Odile Maliet
Maintainer: Michael Blum <[email protected]>
Depends: R (>= 2.0.0), ape
Imports: quantreg, cubature, coda, pbapply
Description: Simulation and analysis
of phylogenetic tree topologies using statistical indices. It
is a companion library of the 'ape' package. It provides
additional functions for reading, plotting, manipulating
phylogenetic trees. It also offers convenient web-access to
public databases, and enables testing null models of
macroevolution using corrected test statistics. Trees of class
"phylo" (from 'ape' package) can be converted easily.
Implements methods described in Bortolussi et al. (2005)
<doi:10.1093/bioinformatics/bti798> and Maliet et al. (2017)
<doi:10.1101/224295>.
License: GPL (>= 2)
Encoding: latin1
Repository: CRAN