Custom genome and GFF to informative manhattan plot

[bioinfowheat]

Looks like a powerful tool, but I'm hitting all kinds of walls trying to bring in some simple TSV files of data. I imagine a bit of help and I can really explore your tool. Happy to help with documentation via an RMD to show how far I can get.

Right now I have a BED of my genome, and a Fst file (chr, start,stop,value. I give examples here. its not clear how to pull this into toGRanges

genome.bed
1 1 200000
2 1 200000
3 1 200000

fst.tsv
1 1 50000 0.0853502
1 50000 100000 0.0120727
1 100000 150000 0.0928059
1 150000 200000 0.12345
2 1 50000 0.0853502
2 50000 100000 0.0120727
2 100000 150000 0.0928059
2 150000 200000 0.12345
3 1 50000 0.0853502
3 50000 100000 0.0120727
3 100000 150000 0.0928059
3 150000 200000 0.12345