Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix s3bucket path overwriting at resaving the xml #10

Closed
kgabor opened this issue Apr 13, 2024 · 0 comments · Fixed by #11
Closed

Fix s3bucket path overwriting at resaving the xml #10

kgabor opened this issue Apr 13, 2024 · 0 comments · Fixed by #11
Assignees

Comments

@kgabor
Copy link
Collaborator

kgabor commented Apr 13, 2024

The path of the xml e.g. .../results/bigstitcher.xml causes the zarr path in the xml to be rewritten with the absolute path

<s3bucket>aind-open-data</s3bucket>
<zarr type="absolute">exaSPIM_675375_2024-02-27_18-50-24/SPIM.ome.zarr</zarr>

-> /results/exaSPIM_675375...

Keep s3bucket paths absolute and unchanged.

@kgabor kgabor self-assigned this Apr 17, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging a pull request may close this issue.

1 participant