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Update README.md
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billzt authored Mar 10, 2020
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Expand Up @@ -14,28 +14,28 @@ This repository is based on Python3 and acts as the successor of legacy [PrimerS
## Install
### Via PIP (release only)
```
pip3 install primerserver2
$ pip3 install primerserver2
```

### Via Github
```
git clone https://github.com/billzt/PrimerServer2.git
cd PrimerServer2
python3 setup.py install
$ git clone https://github.com/billzt/PrimerServer2.git
$ cd PrimerServer2
$ python3 setup.py install
```

## Run testing commands
```
# (if installed from pip,) tests/query_design_multiple and tests/example.fa can be obtained from this github repository.
** (if installed from pip,) tests/query_design_multiple and tests/example.fa can be obtained from this github repository.
# full mode: design primers and check specificity
primertool full tests/query_design_multiple tests/example.fa
** full mode: design primers and check specificity
$ primertool full tests/query_design_multiple tests/example.fa
# design mode: design primers only
primertool design tests/query_design_multiple tests/example.fa
** design mode: design primers only
$ primertool design tests/query_design_multiple tests/example.fa
# check mode: check specificity only
primertool check tests/query_check_multiple tests/example.fa
** check mode: check specificity only
$ primertool check tests/query_check_multiple tests/example.fa
```

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