diff --git a/README.md b/README.md index 58e49ce..ffb2ae3 100644 --- a/README.md +++ b/README.md @@ -125,8 +125,8 @@ qiime mmvec heatmap \ --i-ranks ranks.qza \ --m-microbe-metadata-file taxonomy.tsv \ --m-microbe-metadata-column Taxon \ - --m-metabolite-metadata-file metabolite-metadata.txt \ - --m-metabolite-metadata-column Compound_Source \ + --m-metabolite-metadata-file metabolite-metadata.txt \ + --m-metabolite-metadata-column Compound_Source \ --p-level 5 \ --o-visualization ranks-heatmap.qzv ``` @@ -155,12 +155,12 @@ qiime mmvec paired-heatmap \ --i-ranks ranks.qza \ --i-microbes-table otus_nt.qza \ --i-metabolites-table lcms_nt.qza \ - --m-microbe-metadata-file taxonomy.tsv \ + --m-microbe-metadata-file taxonomy.tsv \ --m-microbe-metadata-column Taxon \ - --p-features TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGTACGGTAGAGGGTGGTGGAATTTCCTG \ + --p-features TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGTACGGTAGAGGGTGGTGGAATTTCCTG \ --p-features TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTAGGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT \ --p-top-k-microbes 0 \ - --p-normalize rel_row \ + --p-normalize rel_row \ --p-top-k-metabolites 100 \ --p-level 6 \ --o-visualization paired-heatmap-top2.qzv