diff --git a/src/biomappings/resources/incorrect.tsv b/src/biomappings/resources/incorrect.tsv index a535dc31..5ccf84b9 100644 --- a/src/biomappings/resources/incorrect.tsv +++ b/src/biomappings/resources/incorrect.tsv @@ -883,6 +883,7 @@ mondo 0007028 rotator cuff syndrome skos:exactMatch mesh D000070636 Rotator Cuff mondo 0007323 Chondronectin skos:exactMatch mesh C029172 chondronectin protein, human semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mondo 0015053 hereditary angioedema type 1 skos:exactMatch mesh D056829 Hereditary Angioedema Types I and II semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0020320 acute myeloblastic leukemia with maturation skos:exactMatch mesh D000650 Amnion semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mondo 0021248 nervous system neoplasm skos:exactMatch mesh D009380 Neoplasms, Nerve Tissue semapv:ManualMappingCuration orcid:0000-0002-1216-4761 semapv:LexicalMatching generate_mondo_mesh_mappings.py 0.9 mondo 0021661 coronary atherosclerosis skos:exactMatch mesh D003324 Coronary Artery Disease semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0044346 echinococcus granulosus infectious disease skos:exactMatch mesh D048209 Echinococcus granulosus semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0100073 methicillin-resistant staphylococcus aureus infectious disease skos:exactMatch mesh D055624 Methicillin-Resistant Staphylococcus aureus semapv:ManualMappingCuration orcid:0000-0001-9439-5346 diff --git a/src/biomappings/resources/mappings.tsv b/src/biomappings/resources/mappings.tsv index 61abf659..9f4a3c93 100644 --- a/src/biomappings/resources/mappings.tsv +++ b/src/biomappings/resources/mappings.tsv @@ -9041,6 +9041,7 @@ mondo 0019107 Rh deficiency syndrome skos:exactMatch mesh C562717 Rh Deficiency mondo 0019155 Leydig cell hypoplasia skos:exactMatch mesh C562567 Leydig Cell Hypoplasia semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0019169 pyruvate dehydrogenase deficiency skos:exactMatch mesh D015325 Pyruvate Dehydrogenase Complex Deficiency Disease semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0019353 Stargardt disease skos:exactMatch mesh D000080362 Stargardt Disease semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mondo 0019636 renal agenesis, unilateral skos:exactMatch mesh D000075529 Solitary Kidney semapv:ManualMappingCuration orcid:0000-0002-1216-4761 semapv:LexicalMatching generate_mondo_mesh_mappings.py 0.9 mondo 0019669 hypochondrogenesis skos:exactMatch mesh C563007 Hypochondrogenesis semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0019760 terminal transverse defects of arm skos:exactMatch mesh C565681 Terminal Transverse Defects of Arm semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0019804 tracheomalacia skos:exactMatch mesh D055090 Tracheomalacia semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -9050,6 +9051,7 @@ mondo 0020540 ovarian gynandroblastoma skos:exactMatch mesh C538459 Ovarian gyna mondo 0020756 migraine, familial hemiplegic, 1 skos:exactMatch mesh C536890 Hemiplegic migraine, familial type 1 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0020792 dwarfism with tall vertebrae skos:exactMatch mesh C535725 Dwarfism tall vertebrae semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0020806 sinoatrial block skos:exactMatch mesh D012848 Sinoatrial Block semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mondo 0021053 carotid body paraganglioma skos:exactMatch mesh D002345 Carotid Body Tumor semapv:ManualMappingCuration orcid:0000-0002-1216-4761 semapv:LexicalMatching generate_mondo_mesh_mappings.py 0.9 mondo 0021065 pleural neoplasm skos:exactMatch mesh D010997 Pleural Neoplasms semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0021092 fallopian tube neoplasm skos:exactMatch mesh D005185 Fallopian Tube Neoplasms semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0021106 laminopathy skos:exactMatch mesh D000083083 Laminopathies semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -9081,9 +9083,11 @@ mondo 0041161 endometrial hyperplasia skos:exactMatch mesh D004714 Endometrial H mondo 0041656 ST-elevation myocardial infarction skos:exactMatch mesh D000072657 ST Elevation Myocardial Infarction semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0041751 multibacillary leprosy skos:exactMatch mesh D056006 Leprosy, Multibacillary semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0041752 paucibacillary leprosy skos:exactMatch mesh D056005 Leprosy, Paucibacillary semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mondo 0044746 zoonotic bacterial infection skos:exactMatch mesh D000086966 Bacterial Zoonoses semapv:ManualMappingCuration orcid:0000-0002-1216-4761 semapv:LexicalMatching generate_mondo_mesh_mappings.py 0.9 mondo 0044877 paraneoplastic cerebellar degeneration skos:exactMatch mesh D020362 Paraneoplastic Cerebellar Degeneration semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0054868 meconium ileus skos:exactMatch mesh D000074270 Meconium Ileus semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0100053 anaphylaxis skos:exactMatch mesh D000707 Anaphylaxis semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mondo 0100064 tyrosine hydroxylase deficiency skos:exactMatch mesh C537537 Segawa syndrome, autosomal recessive semapv:ManualMappingCuration orcid:0000-0002-1216-4761 semapv:LexicalMatching generate_mondo_mesh_mappings.py 0.9 mondo 0100075 jaw fracture skos:exactMatch mesh D007572 Jaw Fractures semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0100115 acute flaccid myelitis skos:exactMatch mesh C000629404 acute flaccid myelitis semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mondo 0100120 vector-borne disease skos:exactMatch mesh D000079426 Vector Borne Diseases semapv:ManualMappingCuration orcid:0000-0001-9439-5346 diff --git a/src/biomappings/resources/predictions.tsv b/src/biomappings/resources/predictions.tsv index 4b003db9..4c255dc5 100644 --- a/src/biomappings/resources/predictions.tsv +++ b/src/biomappings/resources/predictions.tsv @@ -38784,16 +38784,11 @@ mondo 0018951 distal myopathy with vocal cord weakness skos:exactMatch mesh C565 mondo 0019203 acute interstitial pneumonia skos:exactMatch mesh D000080203 Hamman-Rich Syndrome semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0019308 junctional epidermolysis bullosa inversa skos:exactMatch mesh C535958 Epidermolysis bullosa inversa dystrophica semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0019518 Waardenburg-Shah syndrome skos:exactMatch mesh C536467 Waardenburg syndrome, type 4 semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py -mondo 0019636 renal agenesis, unilateral skos:exactMatch mesh D000075529 Solitary Kidney semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0020506 ovarioleukodystrophy skos:exactMatch mesh C565836 Vanishing White Matter Leukodystrophy with Ovarian Failure semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py -mondo 0021053 carotid body paraganglioma skos:exactMatch mesh D002345 Carotid Body Tumor semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py -mondo 0021248 nervous system neoplasm skos:exactMatch mesh D009380 Neoplasms, Nerve Tissue semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0024685 Philadelphia-positive myelogenous leukemia skos:exactMatch mesh D015466 Leukemia, Myeloid, Chronic-Phase semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0030639 Teebi hypertelorism syndrome skos:exactMatch mesh C536951 Teebi syndrome semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0031169 odontochondrodysplasia skos:exactMatch mesh C535792 Spondylometaphyseal dysplasia with dentinogenesis imperfecta semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py -mondo 0044746 zoonotic bacterial infection skos:exactMatch mesh D000086966 Bacterial Zoonoses semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0100001 alpha-gal syndrome skos:exactMatch mesh C000655084 red meat allergy semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py -mondo 0100064 tyrosine hydroxylase deficiency skos:exactMatch mesh C537537 Segawa syndrome, autosomal recessive semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0100089 GATA1-Related X-Linked Cytopenia skos:exactMatch mesh C564525 Dyserythropoietic Anemia with Thrombocytopenia semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0100184 GTP cyclohydrolase I deficiency skos:exactMatch mesh C562656 Hyperphenylalaninemia, BH4-Deficient, B semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py mondo 0100234 paroxysmal familial ventricular fibrillation skos:exactMatch mesh C537182 Paroxysmal ventricular fibrillation semapv:LexicalMatching 0.9 generate_mondo_mesh_mappings.py