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run_batch.sh
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run_batch.sh
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#!/usr/bin/env bash
CONFIG=groundtruth
GRID=search_space
REPEAT=3
MAX_JOBS=12
SLEEP=1
MAIN=main
# generate configs (after controlling computational budget)
# please remove --config_budget, if don't control computational budget
python configs_gen.py --config configs/personal/${CONFIG}.yaml \
--grid grids/personal/${GRID}.txt \
--out_dir configs
#python configs_gen.py --config configs/ChemKG/${CONFIG}.yaml --config_budget configs/ChemKG/${CONFIG}.yaml --grid grids/ChemKG/${GRID}.txt --out_dir configs
# run batch of configs
# Args: config_dir, num of repeats, max jobs running, sleep time
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# aggregate results for the batch
python agg_batch.py --dir results/${CONFIG}_grid_${GRID}
# python agg_batch.py --dir results/personal_graph_grid_personal_graph_mod
GRID=proxy_mod27_2
python configs_gen.py --config configs/personal/${CONFIG}.yaml \
--grid grids/personal/${GRID}.txt \
--out_dir configs
#python configs_gen.py --config configs/ChemKG/${CONFIG}.yaml --config_budget configs/ChemKG/${CONFIG}.yaml --grid grids/ChemKG/${GRID}.txt --out_dir configs
# run batch of configs
# Args: config_dir, num of repeats, max jobs running, sleep time
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# aggregate results for the batch
python agg_batch.py --dir results/${CONFIG}_grid_${GRID}
GRID=proxy_mod27_3
python configs_gen.py --config configs/personal/${CONFIG}.yaml \
--grid grids/personal/${GRID}.txt \
--out_dir configs
#python configs_gen.py --config configs/ChemKG/${CONFIG}.yaml --config_budget configs/ChemKG/${CONFIG}.yaml --grid grids/ChemKG/${GRID}.txt --out_dir configs
# run batch of configs
# Args: config_dir, num of repeats, max jobs running, sleep time
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# rerun missed / stopped experiments
bash parallel.sh configs/${CONFIG}_grid_${GRID} $REPEAT $MAX_JOBS $SLEEP $MAIN
# aggregate results for the batch
python agg_batch.py --dir results/${CONFIG}_grid_${GRID}