Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Uncertainty Visualization #56

Open
mahsageshvadi opened this issue Apr 17, 2024 · 0 comments
Open

Uncertainty Visualization #56

mahsageshvadi opened this issue Apr 17, 2024 · 0 comments

Comments

@mahsageshvadi
Copy link

mahsageshvadi commented Apr 17, 2024

All predictions inherently have some level of uncertainty, but often this uncertainty is disregarded as it doesn't significantly affect most practical applications. However, in certain critical areas like medical imaging, such as tumor resection surgery, where precision is important, considering uncertainty becomes crucial.

Our project focuses on addressing the phenomenon known as brain shift through advanced visualization techniques. During tumor resection surgery, the shape of the brain changes due to various factors. Consequently, relying on MRI images for navigation becomes unfeasible. To address this, we use registration techniques to predict an updated MRI view of the brain. However, these predictions come with inherent uncertainty, which must be accounted for. Now, the challenge is to visualize uncertainty.

We've developed a tool for visualizing uncertainty in 3D Slicer specifically designed for tumor resection surgery. Surgeons can explore various features to find the one that suits their needs best. Additionally, it's designed to work with all types of medical images.

How do surgeons trust our visualization?

We need to evaluate different visualizations to encourage surgeons to use them. We cannot assess them in a real setting because we cannot risk patients' quality and quantity of life. So, we developed a game within our tool where users can engage in a simulation task: carving out the tumor from a shifted medical image and earning points. They can compare different visualization techniques and determine which one is most helpful for them.

Link to our tool's code:
https://github.com/mahsageshvadi/UncertaintyVisualization

BrainShift_2

Screen Shot 2024-04-11 at 5 37 34 PM

Screen shot of our evaluation game

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant