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Update analyze_run.py
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fsalbeez committed Aug 26, 2024
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Expand Up @@ -332,6 +332,7 @@
# apply ntc_check to the t13_hit_output df to generate a list of all ntc positive assays
assigned_signal_norm_2 = pd.DataFrame(assigned_norms['signal_norm_raw']).copy() # make a copy of assigned_signal_norm dataframe


high_raw_ntc_signal = qual_checks.ntc_check(assigned_signal_norm_2)
QC_lines.append("4. Evaluation of No Target Control (NTC) Contamination \n")
if high_raw_ntc_signal:
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