Plot SV counts for all VCFs in FilterBatchSites (#860)

Author: epiercehoffman

wdl/FilterBatchSites.wdl

@@ -78,7 +78,7 @@ workflow FilterBatchSites {
   call sv_counts.PlotSVCountsPerSample {
     input:
       prefix = batch,
-      vcfs=[FilterAnnotateVcf.annotated_vcf[0], FilterAnnotateVcf.annotated_vcf[1], FilterAnnotateVcf.annotated_vcf[2], FilterAnnotateVcf.annotated_vcf[3], FilterAnnotateVcf.annotated_vcf[4]],
+      vcfs=[FilterAnnotateVcf.annotated_vcf[0], FilterAnnotateVcf.annotated_vcf[1], FilterAnnotateVcf.annotated_vcf[2], FilterAnnotateVcf.annotated_vcf[3], FilterAnnotateVcf.annotated_vcf[4], FilterAnnotateVcf.annotated_vcf[5]],
       N_IQR_cutoff = N_IQR_cutoff_plotting,
       sv_pipeline_docker = sv_pipeline_docker,
       runtime_attr_count_svs = runtime_attr_count_svs,