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Add average SNVs per person to stats page #1507

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rileyhgrant opened this issue Apr 19, 2024 · 2 comments
Open

Add average SNVs per person to stats page #1507

rileyhgrant opened this issue Apr 19, 2024 · 2 comments
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@rileyhgrant
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rileyhgrant commented Apr 19, 2024

To be calculated by production team and added to Stats page after

Related: https://github.com/broadinstitute/gnomad_production/issues/1438

@rileyhgrant rileyhgrant changed the title (no issue) | (@rileyhgrant) Update stats page to include average number of SNVs per person (still being calculated) -- edit to add that this has been pushed to post-v4.1 (hoping to have shortly afterwards) Add average SNVs per person to stats page Apr 19, 2024
@matren395
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matren395 commented Aug 13, 2024

Mega Summary is that, for Autosomal+Par Exomes, for variants passing variant qc:

gnomAD: 94,247.60 SNVs/person
non-UKB: 107,439.08 SNVs/person
UKB: 84,291.42 SNVs/person

for Autosomal+SNP Exomes, for all variants passing variant qc :
gnomAD: 4,749,800.00 SNVs/person

all stats are for all imputed genetic ancestries

@rileyhgrant rileyhgrant self-assigned this Sep 5, 2024
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