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Merge branch 'qh/denovo' of https://github.com/broadinstitute/gnomad_qc into qh/denovo
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gnomad_qc/v4/create_release/create_de_novo_release.py

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@@ -112,7 +112,7 @@ def get_releasable_de_novo_calls_ht(
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:param mt: Dense MatrixTable of the releasable trios.
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:param priors_ht: Table with AFs used as population frequency priors in de novo calculations.
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:param ped: Pedigree.
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:param test: Run test on chr20. Default is False.
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:param test: Whether to filter to chr20 for testing. Default is False.
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:return: Hail Table with de novo calls.
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"""
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if test:
@@ -456,7 +456,7 @@ def get_script_argument_parser() -> argparse.ArgumentParser:
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)
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parser.add_argument(
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"--generate-de-novo-calls",
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help="Generate de novo calls " "HT.",
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help="Generate de novo calls HT.",
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action="store_true",
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)
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parser.add_argument(

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