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Future work #40

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shntnu opened this issue Aug 24, 2021 · 2 comments
Open

Future work #40

shntnu opened this issue Aug 24, 2021 · 2 comments

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@shntnu
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shntnu commented Aug 24, 2021

Here's a random grab bag of analysis we wish we could do but will bump out to future work

  • (Supervised) MOA prediction using spherized Cell Painting profiles (we use Level 4)
@gwaybio
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gwaybio commented Oct 14, 2021

@shntnu
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shntnu commented Nov 5, 2021

I think we should acknowledge AWS Open Data but I need to find out the protocol here; it makes no more sense to acknowledge AWS than it does to acknowledge IDR. I think citing them in some form is much more sensible and meaningful.

This is what we did for IDR in Cell Health https://www.molbiolcell.org/doi/10.1091/mbc.E20-12-0784

We deposited raw and illumination-corrected images to the Image Data Resource (https://idr.openmicroscopy.org) under accession number idr0080 (Williams et al., 2017).

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