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bsmn-common-workflow.dot
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bsmn-common-workflow.dot
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digraph {compound=true
subgraph "cluster_synapse-bsmn-common-workflow.cwl" { label="synapse-bsmn-common-workflow.cwl"
"synapse-bsmn-common-workflow.cwl#run-bwa-mem" [label="run-bwa-mem"]
"synapse-bsmn-common-workflow.cwl#download-mate1-files" [label="download-mate1-files"]
"synapse-bsmn-common-workflow.cwl#run-sambamba-sort" [label="run-sambamba-sort"]
"synapse-bsmn-common-workflow.cwl#download-mate2-files" [label="download-mate2-files"]
"synapse-bsmn-common-workflow.cwl#make-read-group-header" [label="make-read-group-header"]
"synapse-bsmn-common-workflow.cwl#run-bwa-index" [label="run-bwa-index"]
"synapse-bsmn-common-workflow.cwl#get-mate1-files" [label="get-mate1-files"]
"synapse-bsmn-common-workflow.cwl#run-sambamba-view" [label="run-sambamba-view"]
"synapse-bsmn-common-workflow.cwl#get-platform-unit" [label="get-platform-unit"]
"synapse-bsmn-common-workflow.cwl#get-mate2-files" [label="get-mate2-files"]
}
"workflow-entrypoint.cwl#get-prefix" [label="get-prefix"]
"workflow-entrypoint.cwl#get-samples-from-file-table" [label="get-samples-from-file-table"]
"workflow-entrypoint.cwl#get-sample-file-table" [label="get-sample-file-table"]
"synapse-bsmn-common-workflow.cwl#get-mate1-files" -> "synapse-bsmn-common-workflow.cwl#download-mate1-files" []
"workflow-entrypoint.cwl#get-samples-from-file-table" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" [ lhead="cluster_synapse-bsmn-common-workflow.cwl"]
"synapse-bsmn-common-workflow.cwl#run-sambamba-view" -> "synapse-bsmn-common-workflow.cwl#run-sambamba-sort" []
"workflow-entrypoint.cwl#get-sample-file-table" -> "workflow-entrypoint.cwl#get-samples-from-file-table" []
"synapse-bsmn-common-workflow.cwl#download-mate1-files" -> "synapse-bsmn-common-workflow.cwl#get-platform-unit" []
"synapse-bsmn-common-workflow.cwl#download-mate1-files" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" []
"synapse-bsmn-common-workflow.cwl#make-read-group-header" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" []
"synapse-bsmn-common-workflow.cwl#get-platform-unit" -> "synapse-bsmn-common-workflow.cwl#make-read-group-header" []
"synapse-bsmn-common-workflow.cwl#run-bwa-mem" -> "synapse-bsmn-common-workflow.cwl#run-sambamba-view" []
"synapse-bsmn-common-workflow.cwl#run-bwa-index" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" []
"workflow-entrypoint.cwl#get-prefix" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" [ lhead="cluster_synapse-bsmn-common-workflow.cwl"]
"synapse-bsmn-common-workflow.cwl#get-mate2-files" -> "synapse-bsmn-common-workflow.cwl#download-mate2-files" []
"synapse-bsmn-common-workflow.cwl#download-mate2-files" -> "synapse-bsmn-common-workflow.cwl#run-bwa-mem" []
}