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With an identical command, mosdepth 0.3.1 from bioconda in crg2 annotates many genomics regions as having no coverage that the mosdepth 0.3.1 installed using bioconda in an independent conda environment annotates as callable. The reason for this is unclear; this issue may be relevant. I have downgraded the mosdepth version to 0.2.4 as used in our bcbio installation on the hpf in f5f64ef.
The text was updated successfully, but these errors were encountered:
With an identical command, mosdepth 0.3.1 from bioconda in crg2 annotates many genomics regions as having no coverage that the mosdepth 0.3.1 installed using bioconda in an independent conda environment annotates as callable. The reason for this is unclear; this issue may be relevant. I have downgraded the mosdepth version to 0.2.4 as used in our bcbio installation on the hpf in f5f64ef.
The text was updated successfully, but these errors were encountered: