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simple_rnn.py
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simple_rnn.py
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#!/usr/bin/env python3
# Copyright 2019 Maria Cervera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
# title :mnets/simple_rnn.py
# author :mc, be
# contact :mariacer, [email protected]
# created :10/28/2019
# version :1.0
# python_version :3.6.8
"""
SimpleRNN
---------
Implementation of a simple recurrent neural network that has stacked vanilla RNN
or LSTM layers that are optionally enclosed by fully-connected layers.
An example usage is as a main model, where the main weights are initialized
and protected by a method such as EWC, and the context-modulation patterns of
the neurons are produced by an external hypernetwork.
"""
import torch
import torch.nn as nn
import torch.nn.functional as F
import math
import numpy as np
from mnets.mnet_interface import MainNetInterface
from utils.torch_utils import init_params
class SimpleRNN(nn.Module, MainNetInterface):
"""Implementation of a simple RNN.
This is a simple recurrent network, that receives input vector
:math:`\mathbf{x}` and outputs a vector :math:`\mathbf{y}` of real values.
Note:
The output is non-linear if the last layer is recurrent! Otherwise,
logits are returned (cmp. attribute
:attr:`mnets.mnet_interface.MainNetInterface.has_fc_out`).
Attributes:
bptt_depth (int): The truncation depth for backprop through time.
If ``-1``, backprop through time (BPTT) will unroll all timesteps
present in the input. Otherwise, the forward pass will detach the
RNN hidden states smaller or equal than
``num_timesteps - bptt_depth`` timesteps, resulting in truncated
BPTT (T-BPTT).
num_rec_layers (int): Number of recurrent layers in this network (i.e.,
length of constructor argument ``rnn_layers``).
use_lstm (bool): See constructor argument ``use_lstm``.
Args:
n_in (int): Number of inputs.
rnn_layers (list or tuple): List of integers. Each entry denotes the
size of a recurrent layer. Recurrent layers will simply be stacked
as layers of this network.
If ``fc_layers_pre`` is empty, then the recurrent layers are the
initial layers.
If ``fc_layers`` is empty, then the last entry of this list will
denote the output size.
Note:
This list may never be empty.
fc_layers_pre (list or tuple): List of integers. Before the recurrent
layers a set of fully-connected layers may be added. This might be
specially useful when constructing recurrent autoencoders. The
entries of this list will denote the sizes of those layers.
If ``fc_layers_pre`` is not empty, its first entry will denote the
input size of this network.
fc_layers (list or tuple): List of integers. After the recurrent layers,
a set of fully-connected layers is added. The entries of this list
will denote the sizes of those layers.
If ``fc_layers`` is not empty, its last entry will denote the output
size of this network.
activation: The nonlinearity used in hidden layers.
use_lstm (bool): If set to `True``, the recurrent layers will be LSTM
layers.
use_bias (bool): Whether layers may have bias terms.
no_weights (bool): If set to ``True``, no trainable parameters will be
constructed, i.e., weights are assumed to be produced ad-hoc
by a hypernetwork and passed to the :meth:`forward` method.
init_weights (list, optional): This option is for convinience reasons.
The option expects a list of parameter values that are used to
initialize the network weights. As such, it provides a
convinient way of initializing a network with a weight draw
produced by the hypernetwork.
Note, internal weights (see
:attr:`mnets.mnet_interface.MainNetInterface.weights`) will be
affected by this argument only.
kaiming_rnn_init (bool): By default, PyTorch initializes its recurrent
layers uniformly with an interval defined by the square-root of the
inverse of the layer size.
If this option is enabled, then the recurrent layers will be
initialized using the kaiming init as implemented by the function
:func:`utils.torch_utils.init_params`.
context_mod_last_step (bool): Whether context modulation is applied
at the last time step os a recurrent layer only. If ``False``,
context modulation is applied at every time step.
Note:
This option only applies if ``use_context_mod`` is ``True``.
context_mod_num_ts (int, optional): The maximum number of timesteps.
If specified, context-modulation with a different set of weights is
applied at every timestep. If ``context_mod_separate_layers_per_ts``
is ``True``, then a separate context-mod layer per timestep will be
created. Otherwise, a single context-mod layer is created, but the
expected parameter shapes for this layer are
``[context_mod_num_ts, *context_mod_shape]``.
Note:
This option only applies if ``use_context_mod`` is ``True``.
context_mod_separate_layers_per_ts (bool): If specified, a separate
context-mod layer per timestep is created (required if
``context_mod_no_weights`` is ``False``).
Note:
Only applies if ``context_mod_num_ts`` is specified.
verbose (bool): Whether to print information (e.g., the number of
weights) during the construction of the network.
**kwargs: Keyword arguments regarding context modulation. This class
can process the same context-modulation related arguments as class
:class:`mnets.mlp.MLP` (plus the additional ones noted above).
"""
def __init__(self, n_in=1, rnn_layers=(10,), fc_layers_pre=(),
fc_layers=(1,), activation=torch.nn.Tanh(), use_lstm=False,
use_bias=True, no_weights=False,
init_weights=None, kaiming_rnn_init=False,
context_mod_last_step=False,
context_mod_num_ts=-1,
context_mod_separate_layers_per_ts=False,
verbose=True,
**kwargs):
# FIXME find a way using super to handle multiple inheritance.
nn.Module.__init__(self)
MainNetInterface.__init__(self)
self._bptt_depth = -1
# FIXME Arbitrary restriction.
if activation is None or isinstance(activation, (torch.nn.ReLU, \
torch.nn.Tanh)):
self._a_fun = activation
else:
raise ValueError('Only linear, relu and tanh activations are ' + \
'allowed for recurrent networks.')
if len(rnn_layers) == 0:
raise ValueError('The network always needs to have at least one ' +
'recurrent layer.')
if len(fc_layers) == 0:
has_rec_out_layer = True
#n_out = rnn_layers[-1]
else:
has_rec_out_layer = False
#n_out = fc_layers[-1]
self._n_in = n_in
self._rnn_layers = rnn_layers
self._fc_layers_pre = fc_layers_pre
self._fc_layers = fc_layers
self._no_weights = no_weights
### Parse or set context-mod arguments ###
rem_kwargs = MainNetInterface._parse_context_mod_args(kwargs)
if len(rem_kwargs) > 0:
raise ValueError('Keyword arguments %s unknown.' % str(rem_kwargs))
self._use_context_mod = kwargs['use_context_mod']
self._context_mod_inputs = kwargs['context_mod_inputs']
self._no_last_layer_context_mod = kwargs['no_last_layer_context_mod']
self._context_mod_no_weights = kwargs['context_mod_no_weights']
self._context_mod_post_activation = \
kwargs['context_mod_post_activation']
self._context_mod_gain_offset = kwargs['context_mod_gain_offset']
self._context_mod_gain_softplus = kwargs['context_mod_gain_softplus']
# Context-mod options specific to RNNs
self._context_mod_last_step = context_mod_last_step
# FIXME We have to specify this option even if
# `context_mod_separate_layers_per_ts` is False (in order to set
# sensible parameter shapes). However, the forward method can deal with
# an arbitrary timestep length.
self._context_mod_num_ts = context_mod_num_ts
self._context_mod_separate_layers_per_ts = \
context_mod_separate_layers_per_ts
# More appropriate naming of option.
self._context_mod_outputs = not self._no_last_layer_context_mod
if context_mod_num_ts != -1:
if context_mod_last_step:
raise ValueError('Options "context_mod_last_step" and ' +
'"context_mod_num_ts" are not compatible.')
if not self._context_mod_no_weights and \
not context_mod_separate_layers_per_ts:
raise ValueError('When applying context-mod per timestep ' +
'while maintaining weights internally, option' +
'"context_mod_separate_layers_per_ts" must be set.')
### Parse or set context-mod arguments - DONE ###
self._has_bias = use_bias
self._has_fc_out = True if not has_rec_out_layer else False
# We need to make sure that the last 2 entries of `weights` correspond
# to the weight matrix and bias vector of the last layer.
self._mask_fc_out = True if not has_rec_out_layer else False
# Note, recurrent layers always use non-linearities and their activities
# are squashed by a non-linearity (otherwise, internal states could
# vanish/explode with increasing sequence length).
self._has_linear_out = True if not has_rec_out_layer else False
self._param_shapes = []
self._param_shapes_meta = []
self._weights = None if no_weights and self._context_mod_no_weights \
else nn.ParameterList()
self._hyper_shapes_learned = None \
if not no_weights and not self._context_mod_no_weights else []
self._hyper_shapes_learned_ref = None if self._hyper_shapes_learned \
is None else []
self._layer_weight_tensors = nn.ParameterList()
self._layer_bias_vectors = nn.ParameterList()
self._use_lstm = use_lstm
if use_lstm:
self._rnn_fct = self.lstm_rnn_step
else:
self._rnn_fct = self.basic_rnn_step
#################################################
### Define and initialize context mod weights ###
#################################################
# The context-mod layers consist of sequential layers ordered as:
# - initial fully-connected layers if len(fc_layers_pre)>0
# - recurrent layers
# - final fully-connected layers if len(fc_layers)>0
self._context_mod_layers = nn.ModuleList() if self._use_context_mod \
else None
self._cm_rnn_start_ind = 0
self._num_fc_cm_layers = None
if self._use_context_mod:
cm_layer_inds = []
cm_shapes = []
# Gather sizes of all activation vectors within the network that
# will be subject to context-modulation.
if self._context_mod_inputs:
self._cm_rnn_start_ind += 1
cm_shapes.append([n_in])
# We reserve layer zero for input context-mod. Otherwise, there
# is no layer zero.
cm_layer_inds.append(0)
if len(fc_layers_pre) > 0:
self._cm_rnn_start_ind += len(fc_layers_pre)
# We use odd numbers for actual layers and even number for all
# context-mod layers.
rem_cm_inds = range(2, 2*(len(fc_layers_pre)+len(rnn_layers)+\
len(fc_layers))+1, 2)
num_rec_cm_layers = len(rnn_layers)
if has_rec_out_layer and not self._context_mod_outputs:
num_rec_cm_layers -= 1
self._num_rec_cm_layers = num_rec_cm_layers
jj = 0
# Add initial fully-connected context-mod layers.
num_fc_pre_cm_layers = len(fc_layers_pre)
self._num_fc_pre_cm_layers = num_fc_pre_cm_layers
for i in range(num_fc_pre_cm_layers):
cm_shapes.append([fc_layers_pre[i]])
cm_layer_inds.append(rem_cm_inds[jj])
jj += 1
# Add recurrent context-mod layers.
for i in range(num_rec_cm_layers):
if context_mod_num_ts != -1:
if context_mod_separate_layers_per_ts:
cm_rnn_shapes = [[rnn_layers[i]]] * context_mod_num_ts
else:
# Only a single context-mod layer will be added, but we
# directly edit the correponding `param_shape` later.
assert self._context_mod_no_weights
cm_rnn_shapes = [[rnn_layers[i]]]
else:
cm_rnn_shapes = [[rnn_layers[i]]]
cm_shapes.extend(cm_rnn_shapes)
cm_layer_inds.extend([rem_cm_inds[jj]] * len(cm_rnn_shapes))
jj += 1
# Add final fully-connected context-mod layers.
num_fc_cm_layers = len(fc_layers)
if num_fc_cm_layers > 0 and not self._context_mod_outputs:
num_fc_cm_layers -= 1
self._num_fc_cm_layers = num_fc_cm_layers
for i in range(num_fc_cm_layers):
cm_shapes.append([fc_layers[i]])
cm_layer_inds.append(rem_cm_inds[jj])
jj += 1
self._add_context_mod_layers(cm_shapes, cm_layers=cm_layer_inds)
if context_mod_num_ts != -1 and not \
context_mod_separate_layers_per_ts:
# In this case, there is only one context-mod layer for each
# recurrent layer, but we want to have separate weights per
# timestep.
# Hence, we adapt the expected parameter shape, such that we
# get a different set of weights per timestep. This will be
# split into multiple weights that are succesively fed into the
# same layer inside the forward method.
for i in range(num_rec_cm_layers):
cmod_layer = \
self.context_mod_layers[self._cm_rnn_start_ind+i]
cm_shapes_rnn = [[context_mod_num_ts, *s] for s in \
cmod_layer.param_shapes]
ps_ind = int(np.sum([ \
len(self.context_mod_layers[ii].param_shapes) \
for ii in range(self._cm_rnn_start_ind+i)]))
self._param_shapes[ps_ind:ps_ind+len(cm_shapes_rnn)] = \
cm_shapes_rnn
assert self._hyper_shapes_learned is not None
self._hyper_shapes_learned[ \
ps_ind:ps_ind+len(cm_shapes_rnn)] = cm_shapes_rnn
########################
### Internal weights ###
########################
prev_dim = self._n_in
def define_fc_layer_weights(fc_layers, prev_dim, num_prev_layers):
"""Define the weights and shapes of the fully-connected layers.
Args:
fc_layers (list): The list of fully-connected layer dimensions.
prev_dim (int): The output size of the previous layer.
num_prev_layers (int): The number of upstream layers to the
current one (a layer with its corresponding
context-mod layer(s) count as one layer). Count should
start at ``1``.
Returns:
(int): The output size of the last fully-connected layer
considered here.
"""
# FIXME We should instead build an MLP instance. But then we still
# have to adapt all attributes accordingly.
for i, n_fc in enumerate(fc_layers):
s_w = [n_fc, prev_dim]
s_b = [n_fc] if self._has_bias else None
for j, s in enumerate([s_w, s_b]):
if s is None:
continue
is_bias = True
if j % 2 == 0:
is_bias = False
if not self._no_weights:
self._weights.append(nn.Parameter(torch.Tensor(*s),
requires_grad=True))
if is_bias:
self._layer_bias_vectors.append(self._weights[-1])
else:
self._layer_weight_tensors.append(self._weights[-1])
else:
self._hyper_shapes_learned.append(s)
self._hyper_shapes_learned_ref.append( \
len(self.param_shapes))
self._param_shapes.append(s)
self._param_shapes_meta.append({
'name': 'bias' if is_bias else 'weight',
'index': -1 if self._no_weights else \
len(self._weights)-1,
'layer': i * 2 + num_prev_layers, # Odd numbers
})
prev_dim = n_fc
return prev_dim
### Initial fully-connected layers.
prev_dim = define_fc_layer_weights(self._fc_layers_pre, prev_dim, 1)
### Recurrent layers.
coeff = 4 if self._use_lstm else 1
for i, n_rec in enumerate(self._rnn_layers):
# Input-to-hidden
s_w_ih = [n_rec*coeff, prev_dim]
s_b_ih = [n_rec*coeff] if use_bias else None
# Hidden-to-hidden
s_w_hh = [n_rec*coeff, n_rec]
s_b_hh = [n_rec*coeff] if use_bias else None
# Hidden-to-output.
# Note, for an LSTM cell, the hidden state vector is also the
# output vector.
if not self._use_lstm:
s_w_ho = [n_rec, n_rec]
s_b_ho = [n_rec] if use_bias else None
else:
s_w_ho = None
s_b_ho = None
for j, s in enumerate([s_w_ih, s_b_ih, s_w_hh, s_b_hh, s_w_ho,
s_b_ho]):
if s is None:
continue
is_bias = True
if j % 2 == 0:
is_bias = False
wtype = 'ih'
if 2 <= j < 4:
wtype = 'hh'
elif j >=4:
wtype = 'ho'
if not no_weights:
self._weights.append(nn.Parameter(torch.Tensor(*s),
requires_grad=True))
if is_bias:
self._layer_bias_vectors.append(self._weights[-1])
else:
self._layer_weight_tensors.append(self._weights[-1])
else:
self._hyper_shapes_learned.append(s)
self._hyper_shapes_learned_ref.append( \
len(self.param_shapes))
self._param_shapes.append(s)
self._param_shapes_meta.append({
'name': 'bias' if is_bias else 'weight',
'index': -1 if no_weights else len(self._weights)-1,
'layer': i * 2 + 1 + 2 * len(fc_layers_pre), # Odd numbers
'info': wtype
})
prev_dim = n_rec
### Fully-connected layers.
prev_dim = define_fc_layer_weights(self._fc_layers, prev_dim, \
1 + 2 * len(fc_layers_pre) + 2 * len(rnn_layers))
### Initialize weights.
if init_weights is not None:
assert self._weights is not None
assert len(init_weights) == len(self.weights)
for i in range(len(init_weights)):
assert np.all(np.equal(list(init_weights[i].shape),
self.weights[i].shape))
self.weights[i].data = init_weights[i]
else:
rec_start = len(fc_layers_pre)
rec_end = rec_start + len(rnn_layers) * (2 if use_lstm else 3)
# Note, Pytorch applies a uniform init to its recurrent layers, as
# defined here:
# https://github.com/pytorch/pytorch/blob/master/torch/nn/modules/rnn.py#L155
for i in range(len(self._layer_weight_tensors)):
if i >=rec_start and i < rec_end:
# Recurrent layer weights.
if kaiming_rnn_init:
init_params(self._layer_weight_tensors[i],
self._layer_bias_vectors[i] if use_bias else None)
else:
a = 1.0 / math.sqrt(rnn_layers[(i-rec_start) // \
(2 if use_lstm else 3)])
nn.init.uniform_(self._layer_weight_tensors[i], -a, a)
if use_bias:
nn.init.uniform_(self._layer_bias_vectors[i], -a, a)
else:
# FC layer weights.
init_params(self._layer_weight_tensors[i],
self._layer_bias_vectors[i] if use_bias else None)
num_weights = MainNetInterface.shapes_to_num_weights(self._param_shapes)
if verbose:
if self._use_context_mod:
cm_num_weights = \
MainNetInterface.shapes_to_num_weights(cm_shapes)
print('Creating a simple RNN with %d weights' % num_weights
+ (' (including %d weights associated with-' % cm_num_weights
+ 'context modulation)' if self._use_context_mod else '')
+ '.')
self._is_properly_setup()
@property
def bptt_depth(self):
"""Getter for attribute :attr:`bptt_depth`."""
return self._bptt_depth
@bptt_depth.setter
def bptt_depth(self, value):
"""Setter for attribute :attr:`bptt_depth`."""
self._bptt_depth = value
@property
def num_rec_layers(self):
"""Getter for read-only attribute :attr:`num_rec_layers`."""
return len(self._rnn_layers)
@property
def use_lstm(self):
"""Getter for read-only attribute :attr:`use_lstm`."""
return self._use_lstm
def split_cm_weights(self, cm_weights, condition, num_ts=0):
"""Split context-mod weights per context-mod layer.
Args:
cm_weights (torch.Tensor): All context modulation weights.
condition (optional, int): If provided, then this argument will be
passed as argument ``ckpt_id`` to the method
:meth:`utils.context_mod_layer.ContextModLayer.forward`.
num_ts (int): The length of the sequences.
Returns:
(Tuple): Where the tuple contains:
- **cm_inputs_weights**: The cm input weights.
- **cm_fc_pre_layer_weights**: The cm pre-recurrent weights.
- **cm_rec_layer_weights**: The cm recurrent weights.
- **cm_fc_layer_weights**: The cm post-recurrent weights.
- **n_cm_rec**: The number of recurrent cm layers.
- **cmod_cond**: The context-mod condition.
"""
n_cm_rec = -1
cm_fc_pre_layer_weights = None
cm_fc_layer_weights = None
cm_inputs_weights = None
cm_rec_layer_weights = None
if cm_weights is not None:
if self._context_mod_num_ts != -1 and \
self._context_mod_separate_layers_per_ts:
assert num_ts <= self._context_mod_num_ts
# Note, an mnet layer might contain multiple context-mod layers
# (a recurrent layer can have a separate context-mod layer per
# timestep).
cm_fc_pre_layer_weights = []
cm_rec_layer_weights = [[] for _ in range(self._num_rec_cm_layers)]
cm_fc_layer_weights = []
# Number of cm-layers per recurrent layer.
n_cm_per_rec = self._context_mod_num_ts if \
self._context_mod_num_ts != -1 and \
self._context_mod_separate_layers_per_ts else 1
n_cm_rec = n_cm_per_rec * self._num_rec_cm_layers
cm_start = 0
for i, cm_layer in enumerate(self.context_mod_layers):
cm_end = cm_start + len(cm_layer.param_shapes)
if i == 0 and self._context_mod_inputs:
cm_inputs_weights = cm_weights[cm_start:cm_end]
elif i < self._cm_rnn_start_ind:
cm_fc_pre_layer_weights.append(cm_weights[cm_start:cm_end])
elif i >= self._cm_rnn_start_ind and \
i < self._cm_rnn_start_ind + n_cm_rec:
# Index of recurrent layer.
i_r = (i-self._cm_rnn_start_ind) // n_cm_per_rec
cm_rec_layer_weights[i_r].append( \
cm_weights[cm_start:cm_end])
else:
cm_fc_layer_weights.append(cm_weights[cm_start:cm_end])
cm_start = cm_end
# We need to split the context-mod weights in the following case,
# as they are currently just stacked on top of each other.
if self._context_mod_num_ts != -1 and \
not self._context_mod_separate_layers_per_ts:
for i, cm_w_list in enumerate(cm_rec_layer_weights):
assert len(cm_w_list) == 1
cm_rnn_weights = cm_w_list[0]
cm_rnn_layer = self.context_mod_layers[ \
self._cm_rnn_start_ind+i]
assert len(cm_rnn_weights) == len(cm_rnn_layer.param_shapes)
# The first dimension are the weights of this layer per
# timestep.
num_ts_cm = -1
for j, s in enumerate(cm_rnn_layer.param_shapes):
assert len(cm_rnn_weights[j].shape) == len(s) + 1
if j == 0:
num_ts_cm = cm_rnn_weights[j].shape[0]
else:
assert num_ts_cm == cm_rnn_weights[j].shape[0]
assert num_ts <= num_ts_cm
cm_w_chunked = [None] * len(cm_rnn_weights)
for j, cm_w in enumerate(cm_rnn_weights):
cm_w_chunked[j] = torch.chunk(cm_w, num_ts_cm, dim=0)
# Now we gather all these chunks to assemble the weights
# needed per timestep (as if
# `_context_mod_separate_layers_per_t` were True).
cm_w_list = []
for j in range(num_ts_cm):
tmp_list = []
for chunk in cm_w_chunked:
tmp_list.append(chunk[j].squeeze(dim=0))
cm_w_list.append(tmp_list)
cm_rec_layer_weights[i] = cm_w_list
# Note, the last layer does not necessarily have context-mod
# (depending on `self._context_mod_outputs`).
if len(cm_rec_layer_weights) < len(self._rnn_layers):
cm_rec_layer_weights.append(None)
if len(cm_fc_layer_weights) < len(self._fc_layers):
cm_fc_layer_weights.append(None)
#######################
### Parse condition ###
#######################
cmod_cond = None
if condition is not None:
assert isinstance(condition, int)
cmod_cond = condition
# Note, the cm layer will ignore the cmod condition if weights
# are passed.
# FIXME Find a more elegant solution.
cm_inputs_weights = None
cm_fc_pre_layer_weights = [None] * len(cm_fc_pre_layer_weights)
cm_rec_layer_weights = [[None] * len(cm_ws) for cm_ws in \
cm_rec_layer_weights]
cm_fc_layer_weights = [None] * len(cm_fc_layer_weights)
return cm_inputs_weights, cm_fc_pre_layer_weights, cm_fc_layer_weights,\
cm_rec_layer_weights, n_cm_rec, cmod_cond
def split_internal_weights(self, int_weights):
"""Split internal weights per layer.
Args:
int_weights (torch.Tensor): All internal weights.
Returns:
(Tuple): Where the tuple contains:
- **fc_pre_w_weights**: The pre-recurrent w weights.
- **fc_pre_b_weights**: The pre-recurrent b weights.
- **rec_weights**: The recurrent weights.
- **fc_w_weights**:The post-recurrent w weights.
- **fc_b_weights**: The post-recurrent b weights.
"""
n_cm = self._num_context_mod_shapes()
int_meta = self.param_shapes_meta[n_cm:]
assert len(int_meta) == len(int_weights)
fc_pre_w_weights = []
fc_pre_b_weights = []
rec_weights =[[] for _ in range(len(self._rnn_layers))]
fc_w_weights = []
fc_b_weights = []
# Number of pre-fc weights in total.
n_fc_pre = len(self._fc_layers_pre)
if self.has_bias:
n_fc_pre *= 2
# Number of weights per recurrent layer.
if self._use_lstm:
n_rw = 4 if self.has_bias else 2
else:
n_rw = 6 if self.has_bias else 3
for i, w in enumerate(int_weights):
if i < n_fc_pre: # fc pre weights
if int_meta[i]['name'] == 'weight':
fc_pre_w_weights.append(w)
else:
assert int_meta[i]['name'] == 'bias'
fc_pre_b_weights.append(w)
elif i >= n_fc_pre and \
i < n_rw * len(self._rnn_layers) + n_fc_pre: # recurrent w
r_ind = (i - n_fc_pre) // n_rw
rec_weights[r_ind].append(w)
else: # fc weights
if int_meta[i]['name'] == 'weight':
fc_w_weights.append(w)
else:
assert int_meta[i]['name'] == 'bias'
fc_b_weights.append(w)
if not self.has_bias:
assert len(fc_pre_b_weights) == 0
fc_pre_b_weights = [None] * len(fc_pre_w_weights)
assert len(fc_b_weights) == 0
fc_b_weights = [None] * len(fc_w_weights)
return fc_pre_w_weights, fc_pre_b_weights, rec_weights, fc_w_weights, \
fc_b_weights
def split_weights(self, weights):
"""Split weights into internal and context-mod weights.
Extract which weights should be used, I.e., are we using internally
maintained weights or externally given ones or are we even mixing
between these groups.
Args:
weights (torch.Tensor): All weights.
Returns:
(Tuple): Where the tuple contains:
- **int_weights**: The internal weights.
- **cm_weights**: The context-mod weights.
"""
n_cm = self._num_context_mod_shapes()
### FIXME Code copied from MLP its `forward` method ###
# Make sure cm_weights are either `None` or have the correct dimensions.
if weights is None:
weights = self.weights
if self._use_context_mod:
cm_weights = weights[:n_cm]
int_weights = weights[n_cm:]
else:
cm_weights = None
int_weights = weights
else:
int_weights = None
cm_weights = None
if isinstance(weights, dict):
assert 'internal_weights' in weights.keys() or \
'mod_weights' in weights.keys()
if 'internal_weights' in weights.keys():
int_weights = weights['internal_weights']
if 'mod_weights' in weights.keys():
cm_weights = weights['mod_weights']
else:
if self._use_context_mod and \
len(weights) == n_cm:
cm_weights = weights
else:
assert len(weights) == len(self.param_shapes)
if self._use_context_mod:
cm_weights = weights[:n_cm]
int_weights = weights[n_cm:]
else:
int_weights = weights
if self._use_context_mod and cm_weights is None:
if self._context_mod_no_weights:
raise Exception('Network was generated without weights ' +
'for context-mod layers. Hence, they must be passed ' +
'via the "weights" option.')
cm_weights = self.weights[:n_cm]
if int_weights is None:
if self._no_weights:
raise Exception('Network was generated without internal ' +
'weights. Hence, they must be passed via the ' +
'"weights" option.')
if self._context_mod_no_weights:
int_weights = self.weights
else:
int_weights = self.weights[n_cm:]
# Note, context-mod weights might have different shapes, as they
# may be parametrized on a per-sample basis.
if self._use_context_mod:
assert len(cm_weights) == n_cm
int_shapes = self.param_shapes[n_cm:]
assert len(int_weights) == len(int_shapes)
for i, s in enumerate(int_shapes):
assert np.all(np.equal(s, list(int_weights[i].shape)))
### FIXME Code copied until here ###
return int_weights, cm_weights
def forward(self, x, weights=None, distilled_params=None, condition=None,
return_hidden=False, return_hidden_int=False):
"""Compute the output :math:`y` of this network given the input
:math:`x`.
Args:
(....): See docstring of method
:meth:`mnets.mnet_interface.MainNetInterface.forward`. We
provide some more specific information below.
weights (list or dict): See argument ``weights`` of method
:meth:`mnets.mlp.MLP.forward`.
condition (optional, int): If provided, then this argument will be
passed as argument ``ckpt_id`` to the method
:meth:`utils.context_mod_layer.ContextModLayer.forward`.
return_hidden (bool, optional): If ``True``, all hidden activations
of fully-connected and recurrent layers (where we defined
:math:`y_t` as hidden state of vannila RNN layers as these are
the layer output passed to the next layer) are returned.
Specifically, hidden activations are the outputs of each hidden
layer that are passed to the next layer.
return_hidden_int (bool, optional): If ``True``, in addition to
``hidden``, an additional variable ``hidden_int`` is returned
containing the internal hidden states of recurrent layers (i.e.,
the cell states :math:`c_t` for LSTMs and the actual hidden
state :math:`h_t` for Elman layers) are returned. Since fully-
connected layers have no such internal hidden activations, the
corresponding entry in ``hidden_int`` will be ``None``.
Returns:
(torch.Tensor or tuple): Where the tuple is containing:
- **output** (torch.Tensor): The output of the network.
- **hidden** (list): If ``return_hidden`` is ``True``, then the
hidden activities of the layers are returned, which have
the shape ``(seq_length, batch_size, n_hidden)``.
- **hidden_int** (list): If ``return_hidden_int`` is ``True``, then
in addition to ``hidden`` a tensor ``hidden_int`` per recurrent
layer is returned containing internal hidden states. The list will
contain a ``None`` entry for each fully-connected layer to ensure
same length as ``hidden``.
"""
assert distilled_params is None
if ((not self._use_context_mod and self._no_weights) or \
(self._no_weights or self._context_mod_no_weights)) and \
weights is None:
raise Exception('Network was generated without weights. ' +
'Hence, "weights" option may not be None.')
if return_hidden_int and not return_hidden:
raise ValueError('"return_hidden_int" requires "return_hidden" ' + \
'to be set.')
#######################
### Extract weights ###
#######################
# Extract which weights should be used.
int_weights, cm_weights = self.split_weights(weights)
### Split context-mod weights per context-mod layer.
cm_inputs_weights, cm_fc_pre_layer_weights, cm_fc_layer_weights, \
cm_rec_layer_weights, n_cm_rec, cmod_cond = self.split_cm_weights(
cm_weights, condition, num_ts=x.shape[0])
### Extract internal weights.
fc_pre_w_weights, fc_pre_b_weights, rec_weights, fc_w_weights, \
fc_b_weights = self.split_internal_weights(int_weights)
###########################
### Forward Computation ###
###########################
ret_hidden = None
if return_hidden:
ret_hidden = []
ret_hidden_int = [] # the internal hidden activations
h = x
cm_offset = 0
if self._use_context_mod and self._context_mod_inputs:
cm_offset += 1
# Apply context modulation in the inputs.
h = self._context_mod_layers[0].forward(h,
weights=cm_inputs_weights, ckpt_id=cmod_cond, bs_dim=1)
### Initial fully-connected layer activities.
ret_hidden, h = self.compute_fc_outputs(h, fc_pre_w_weights, \
fc_pre_b_weights, len(self._fc_layers_pre), \
cm_fc_pre_layer_weights, cm_offset, cmod_cond, False, ret_hidden)
if return_hidden:
ret_hidden_int = [None] * len(ret_hidden)
### Recurrent layer activities.
for d in range(len(self._rnn_layers)):
if self._use_context_mod:
h, h_int = self.compute_hidden_states(h, d, rec_weights[d],
cm_rec_layer_weights[d], cmod_cond)
else:
h, h_int = self.compute_hidden_states(h, d, rec_weights[d],
None, None)
if return_hidden:
ret_hidden.append(h)
ret_hidden_int.append(h_int)
### Fully-connected layer activities.
cm_offset = self._cm_rnn_start_ind + n_cm_rec
ret_hidden, h = self.compute_fc_outputs(h, fc_w_weights, fc_b_weights, \
self._num_fc_cm_layers, cm_fc_layer_weights, cm_offset, cmod_cond,
True, ret_hidden)
if return_hidden:
ret_hidden_int.extend( \
[None] * (len(ret_hidden)-len(ret_hidden_int)))
# FIXME quite ugly
if return_hidden:
# The last element is the output activity.
ret_hidden.pop()
if return_hidden_int:
ret_hidden_int.pop()
return h, ret_hidden, ret_hidden_int
else:
return h, ret_hidden
else:
return h
def compute_fc_outputs(self, h, fc_w_weights, fc_b_weights, num_fc_cm_layers,
cm_fc_layer_weights, cm_offset, cmod_cond, is_post_fc,
ret_hidden):
"""Compute the forward pass through the fully-connected layers.
This method also appends activations to ``ret_hidden``.
Args:
h (torch.Tensor): The input from the previous layer.
fc_w_weights (list): The weights for the fc layers.
fc_b_weights (list): The biases for the fc layers.
num_fc_cm_layers (int): The number of context-modulation
layers associated with this set of fully-connected layers.
cm_fc_layer_weights (list): The context-modulation weights
associated with the current layers.
cm_offset (int): The index to access the correct context-mod
layers.
cmod_cond (bool): Some condition to perform context modulation.
is_post_fc (bool); Whether those layers are applied as last
layers of the network. In this case, there will be no
activation applied to the last layer outputs.
ret_hidden (list or None): The list where to append the hidden
recurrent activations.
Return:
(Tuple): Tuple containing:
- **ret_hidden**: The hidden recurrent activations.
- **h**: Transformed activation ``h``.
"""
for d in range(len(fc_w_weights)):
use_cm = self._use_context_mod and d < num_fc_cm_layers
# Compute output.
h = F.linear(h, fc_w_weights[d], bias=fc_b_weights[d])
# Context-dependent modulation (pre-activation).
if use_cm and not self._context_mod_post_activation:
h = self._context_mod_layers[cm_offset+d].forward(h,
weights=cm_fc_layer_weights[d], ckpt_id=cmod_cond,
bs_dim=1)
# Non-linearity
# Note, non-linearity is not applied to outputs of the network.
if self._a_fun is not None and \
(not is_post_fc or d < len(fc_w_weights)-1):
h = self._a_fun(h)
# Context-dependent modulation (post-activation).
if use_cm and self._context_mod_post_activation:
h = self._context_mod_layers[cm_offset+d].forward(h,
weights=cm_fc_layer_weights[d], ckpt_id=cmod_cond,
bs_dim=1)
if ret_hidden is not None:
ret_hidden.append(h)
return ret_hidden, h
def compute_hidden_states(self, x, layer_ind, int_weights, cm_weights,
ckpt_id, h_0=None, c_0=None):
"""Compute the hidden states for the recurrent layer ``layer_ind`` from
a sequence of inputs :math:`x`.