From 561d6271c05bc92e1ad1da2e54227b37d50cd62c Mon Sep 17 00:00:00 2001 From: James Gorrie Date: Thu, 28 Nov 2024 12:59:13 +0000 Subject: [PATCH] WIP --- app/api/api_v1/routers/family.py | 2 +- app/model/family.py | 8 +- app/repository/family.py | 34 +- poetry.lock | 526 +++++++++--------- tests/integration_tests/family/test_search.py | 19 + tests/integration_tests/setup_db.py | 8 +- 6 files changed, 317 insertions(+), 280 deletions(-) diff --git a/app/api/api_v1/routers/family.py b/app/api/api_v1/routers/family.py index 3cb5d017..e4911baf 100644 --- a/app/api/api_v1/routers/family.py +++ b/app/api/api_v1/routers/family.py @@ -92,7 +92,7 @@ async def search_family(request: Request) -> list[FamilyReadDTO]: query_params = set_default_query_params(query_params) - VALID_PARAMS = ["q", "title", "summary", "geography", "status", "max_results"] + VALID_PARAMS = ["q", "title", "summary", "geographies", "status", "max_results"] validate_query_params(query_params, VALID_PARAMS) try: diff --git a/app/model/family.py b/app/model/family.py index 0ca016a7..708b4291 100644 --- a/app/model/family.py +++ b/app/model/family.py @@ -1,5 +1,5 @@ from datetime import datetime -from typing import Optional, Union +from typing import Optional from pydantic import BaseModel @@ -12,7 +12,7 @@ class FamilyReadDTO(BaseModel): import_id: str title: str summary: str - geography: str + geographies: list[str] category: str status: str metadata: Json @@ -41,7 +41,7 @@ class FamilyWriteDTO(BaseModel): title: str summary: str - geography: str + geographies: list[str] category: str metadata: Json collections: list[str] @@ -60,7 +60,7 @@ class FamilyCreateDTO(BaseModel): import_id: Optional[str] = None title: str summary: str - geography: Union[str, list[str]] + geographies: list[str] category: str metadata: Json collections: list[str] diff --git a/app/repository/family.py b/app/repository/family.py index ffe42476..e4fb0d1a 100644 --- a/app/repository/family.py +++ b/app/repository/family.py @@ -22,7 +22,7 @@ from db_client.models.organisation.users import Organisation from sqlalchemy import Column, and_ from sqlalchemy import delete as db_delete -from sqlalchemy import desc, func, or_ +from sqlalchemy import desc, or_ from sqlalchemy import update as db_update from sqlalchemy.exc import NoResultFound, OperationalError from sqlalchemy.orm import Query, Session @@ -34,30 +34,24 @@ _LOGGER = logging.getLogger(__name__) -FamilyGeoMetaOrg = Tuple[Family, str, FamilyMetadata, Corpus, Organisation] +FamilyGeoMetaOrg = Tuple[Family, Geography, FamilyMetadata, Corpus, Organisation] def _get_query(db: Session) -> Query: # NOTE: SqlAlchemy will make a complete hash of query generation # if columns are used in the query() call. Therefore, entire # objects are returned. - geo_subquery = ( - db.query( - func.min(Geography.value).label("value"), - FamilyGeography.family_import_id, - ) - .join(FamilyGeography, FamilyGeography.geography_id == Geography.id) - .filter(FamilyGeography.family_import_id == Family.import_id) - .group_by(Geography.value, FamilyGeography.family_import_id) - ).subquery("geo_subquery") - return ( - db.query(Family, geo_subquery.c.value, FamilyMetadata, Corpus, Organisation) # type: ignore + db.query(Family, Geography, FamilyMetadata, Corpus, Organisation) # type: ignore + .join(FamilyGeography, FamilyGeography.family_import_id == Family.import_id) + .join( + Geography, + Geography.id == FamilyGeography.geography_id, + ) .join(FamilyMetadata, FamilyMetadata.family_import_id == Family.import_id) .join(FamilyCorpus, FamilyCorpus.family_import_id == Family.import_id) .join(Corpus, Corpus.import_id == FamilyCorpus.corpus_import_id) .join(Organisation, Corpus.organisation_id == Organisation.id) - .filter(geo_subquery.c.family_import_id == Family.import_id) # type: ignore ) @@ -72,7 +66,7 @@ def _family_to_dto( import_id=str(fam.import_id), title=str(fam.title), summary=str(fam.description), - geography=geo_value, + geographies=[str(geo_value.display_value)], category=str(fam.family_category), status=str(fam.family_status), metadata=metadata, @@ -201,13 +195,9 @@ def search( term = f"%{escape_like(search_params['summary'])}%" search.append(Family.description.ilike(term)) - if "geography" in search_params.keys(): - term = cast(str, search_params["geography"]) - search.append( - or_( - Geography.display_value == term.title(), Geography.value == term.upper() - ) - ) + if "geographies" in search_params.keys(): + term = cast(str, search_params["geographies"]) + search.append(Geography.display_value == term.title()) if "status" in search_params.keys(): term = cast(str, search_params["status"]) diff --git a/poetry.lock b/poetry.lock index 9572437f..c5076c3f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.4 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. 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tests.integration_tests.setup_db import setup_db +def test_search_geographies( + client: TestClient, data_db: Session, superuser_header_token +): + setup_db(data_db) + response = client.get( + "/api/v1/families/?geographies=zimbabwe", + headers=superuser_header_token, + ) + assert response.status_code == status.HTTP_200_OK + data = response.json() + assert isinstance(data, list) + + ids_found = set([f["import_id"] for f in data]) + assert len(ids_found) == 1 + + # expected_ids = set(["A.0.0.2", "A.0.0.3"]) + # assert ids_found.symmetric_difference(expected_ids) == set([]) + + def test_search_family_super( client: TestClient, data_db: Session, superuser_header_token ): diff --git a/tests/integration_tests/setup_db.py b/tests/integration_tests/setup_db.py index ad112ee2..076231b7 100644 --- a/tests/integration_tests/setup_db.py +++ b/tests/integration_tests/setup_db.py @@ -31,7 +31,7 @@ "import_id": "A.0.0.1", "title": "apple", "summary": "", - "geography": "Other", + "geographies": ["AFG"], "category": "UNFCCC", "status": "Created", "metadata": { @@ -57,7 +57,7 @@ "import_id": "A.0.0.2", "title": "apple orange banana", "summary": "apple", - "geography": "Other", + "geographies": ["ZWE"], "category": "UNFCCC", "status": "Created", "metadata": { @@ -83,7 +83,7 @@ "import_id": "A.0.0.3", "title": "title", "summary": "orange peas", - "geography": "Other", + "geographies": ["AFG"], "category": "UNFCCC", "status": "Created", "metadata": {"author": "CPR", "author_type": "Party"}, @@ -490,7 +490,7 @@ def _setup_family_data( geo_id = ( test_db.query(Geography.id) - .filter(Geography.value == data["geography"]) + .filter(Geography.value == data["geographies"][0]) .scalar() )