From 8967067bc2cc2e88afed9c17b0955c7642d1e62b Mon Sep 17 00:00:00 2001 From: Mark Date: Thu, 11 Jul 2024 14:00:44 +0100 Subject: [PATCH] Updating from the data access lib to the sdk. --- cli/test/conftest.py | 3 +- cli/test/test_text2embeddings.py | 2 +- poetry.lock | 2131 ++++++++++++++++++++---------- pyproject.toml | 2 +- src/languages.py | 3 +- src/test/conftest.py | 5 +- src/test/test_languages.py | 3 +- src/test/test_utils.py | 8 +- src/utils.py | 5 +- 9 files changed, 1452 insertions(+), 710 deletions(-) diff --git a/cli/test/conftest.py b/cli/test/conftest.py index 7673af9..5bd183d 100644 --- a/cli/test/conftest.py +++ b/cli/test/conftest.py @@ -4,10 +4,9 @@ import boto3 import botocore.client import pytest +from cpr_sdk.parser_models import BlockType, HTMLTextBlock from moto import mock_s3 -from cpr_data_access.parser_models import BlockType, HTMLTextBlock - class S3Client: """Helper class to connect to S3 and perform actions on buckets and documents.""" diff --git a/cli/test/test_text2embeddings.py b/cli/test/test_text2embeddings.py index bc9a6ca..73caf0e 100644 --- a/cli/test/test_text2embeddings.py +++ b/cli/test/test_text2embeddings.py @@ -6,9 +6,9 @@ import numpy as np from click.testing import CliRunner +from cpr_sdk.parser_models import ParserOutput from cli.text2embeddings import run_as_cli -from cpr_data_access.parser_models import ParserOutput def test_run_encoder_local( diff --git a/poetry.lock b/poetry.lock index 4f30f2f..2767a64 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,112 +1,100 @@ -# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. 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"pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] + [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "8a78f47e13a2daa32b100bea77bacb687cdcb23f203d282d3c04ab26c5c346af" +content-hash = "2957c22e44a031ebb3672632d6f5324cf942e0140106f0fec9c56d5fd2124bec" diff --git a/pyproject.toml b/pyproject.toml index f8fc486..9ad39c5 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -17,8 +17,8 @@ boto3 = "^1.26.153" aws-error-utils = "^2.7.0" moto = "^4.1.11" torch = "2.0.0" -cpr-data-access = {git = "https://github.com/climatepolicyradar/data-access.git", tag = "0.4.0"} python-dotenv = "^1.0.1" +cpr-sdk = "^1.1.6" [tool.poetry.dev-dependencies] black = "^22.1.0" diff --git a/src/languages.py b/src/languages.py index 821cbf5..bed757f 100644 --- a/src/languages.py +++ b/src/languages.py @@ -1,8 +1,9 @@ import logging from typing import List +from cpr_sdk.parser_models import ParserOutput + from src import config -from cpr_data_access.parser_models import ParserOutput logger = logging.getLogger(__name__) diff --git a/src/test/conftest.py b/src/test/conftest.py index e15e610..57eafc2 100644 --- a/src/test/conftest.py +++ b/src/test/conftest.py @@ -5,12 +5,11 @@ import boto3 import botocore.client import pytest +from cpr_sdk.parser_models import HTMLData, ParserOutput +from cpr_sdk.pipeline_general_models import BackendDocument from moto import mock_s3 from pydantic import AnyHttpUrl -from cpr_data_access.parser_models import ParserOutput, HTMLData -from cpr_data_access.pipeline_general_models import BackendDocument - from cli.test.conftest import get_html_text_block diff --git a/src/test/test_languages.py b/src/test/test_languages.py index 4a03f28..0c8dc7d 100644 --- a/src/test/test_languages.py +++ b/src/test/test_languages.py @@ -1,6 +1,7 @@ from typing import List -from cpr_data_access.parser_models import ParserOutput +from cpr_sdk.parser_models import ParserOutput + from src.languages import get_docs_of_supported_language # TODO test that the warning is logged if the document language is not supported by diff --git a/src/test/test_utils.py b/src/test/test_utils.py index 5059a7a..2b6d110 100644 --- a/src/test/test_utils.py +++ b/src/test/test_utils.py @@ -1,17 +1,17 @@ from typing import Sequence import numpy as np -from cpr_data_access.parser_models import BlockType, ParserOutput, PDFTextBlock +from cpr_sdk.parser_models import BlockType, ParserOutput, PDFTextBlock from cli.test.conftest import test_pdf_file_json # noqa: F401 from src import config from src.ml import SBERTEncoder from src.utils import ( - filter_on_block_type, - replace_text_blocks, + encode_parser_output, filter_blocks, + filter_on_block_type, get_ids_with_suffix, - encode_parser_output, + replace_text_blocks, ) diff --git a/src/utils.py b/src/utils.py index a82acd7..fd9d45e 100644 --- a/src/utils.py +++ b/src/utils.py @@ -1,13 +1,12 @@ import logging import os from pathlib import Path -from typing import Optional, Tuple, Union, List, Set, Sequence +from typing import List, Optional, Sequence, Set, Tuple, Union import numpy as np +from cpr_sdk.parser_models import BlockType, ParserOutput, TextBlock from src import config - -from cpr_data_access.parser_models import ParserOutput, TextBlock, BlockType from src.ml import SentenceEncoder from src.s3 import get_s3_keys_with_prefix, s3_object_read_text