From ed228410abbe3f908ea616a0c328ed4d56735581 Mon Sep 17 00:00:00 2001 From: nmdefries Date: Tue, 3 Sep 2024 19:02:58 +0000 Subject: [PATCH] docs: document (GHA) --- DESCRIPTION | 2 +- README.md | 4 ++-- man/covidcast_epidata.Rd | 4 ++-- man/pub_covid_hosp_facility.Rd | 4 ++-- man/pvt_norostat.Rd | 2 +- 5 files changed, 8 insertions(+), 8 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 451c7a15..810b593c 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -40,7 +40,7 @@ Imports: tibble, usethis, xml2 -RoxygenNote: 7.3.1 +RoxygenNote: 7.3.2 Suggests: dplyr, ggplot2, diff --git a/README.md b/README.md index e4d136f0..e7598e4b 100644 --- a/README.md +++ b/README.md @@ -16,7 +16,7 @@ The [Delphi Epidata API](https://cmu-delphi.github.io/delphi-epidata/) provides real-time access to epidemiological surveillance data for influenza, COVID-19, and other diseases from both official government sources such as the [Centers for Disease Control and Prevention -(CDC)](https://data.cdc.gov/), private partners +(CDC)](https://www.cdc.gov/datastatistics/index.html), private partners such as [Facebook (now Meta)](https://delphi.cmu.edu/blog/2020/08/26/covid-19-symptom-surveys-through-facebook/) and [Change Healthcare](https://www.changehealthcare.com/), and other @@ -82,7 +82,7 @@ pak::pkg_install("cmu-delphi/epidatr@dev") ``` Our CRAN listing is -[here](https://CRAN.R-project.org/package=epidatr/index.html). +[here](https://cran.r-project.org/web/packages/epidatr/index.html). ### API Keys diff --git a/man/covidcast_epidata.Rd b/man/covidcast_epidata.Rd index 9fe31718..e11c63b1 100644 --- a/man/covidcast_epidata.Rd +++ b/man/covidcast_epidata.Rd @@ -27,7 +27,7 @@ an object containing fields for every signal: \if{html}{\out{
}}\preformatted{epidata <- covidcast_epidata() epidata$signals -#> # A tibble: 443 x 3 +#> # A tibble: 451 x 3 #> source signal short_description #> #> 1 chng smoothed_outpatient_cli Estimated percentage of outpatie~ @@ -40,7 +40,7 @@ epidata$signals #> 8 covid-act-now pcr_specimen_total_tests Total number of PCR specimens te~ #> 9 doctor-visits smoothed_cli Percentage of daily doctor visit~ #> 10 doctor-visits smoothed_adj_cli Percentage of daily doctor visit~ -#> # i 433 more rows +#> # i 441 more rows }\if{html}{\out{
}} If you use an editor that supports tab completion, such as RStudio, type diff --git a/man/pub_covid_hosp_facility.Rd b/man/pub_covid_hosp_facility.Rd index 59f4ff9b..c71f21c0 100644 --- a/man/pub_covid_hosp_facility.Rd +++ b/man/pub_covid_hosp_facility.Rd @@ -48,8 +48,8 @@ pub_covid_hosp_facility( ) pub_covid_hosp_facility( - hospital_pks = "100075", - collection_weeks = epirange(202001, 202005) + hospital_pks = "050063", + collection_weeks = epirange(20240101, 20240301) ) } } diff --git a/man/pvt_norostat.Rd b/man/pvt_norostat.Rd index 24ffd778..180182e1 100644 --- a/man/pvt_norostat.Rd +++ b/man/pvt_norostat.Rd @@ -30,7 +30,7 @@ the Delphi’s epidemiological data. \dontrun{ pvt_norostat( auth = Sys.getenv("SECRET_API_AUTH_NOROSTAT"), - locations = "1", + locations = "Minnesota, Ohio, Oregon, Tennessee, and Wisconsin", epiweeks = 201233 ) }