From 36c08207b91f40113483ebc27c3bf1178de4238f Mon Sep 17 00:00:00 2001 From: Gavin Rhys Lloyd Date: Thu, 27 Jun 2024 09:24:14 +0100 Subject: [PATCH] minor text edits --- NEWS | 2 +- R/constants.R | 20 ++++++++++---------- man/context.Rd | 2 +- man/input_item.Rd | 2 +- man/output_item.Rd | 2 +- 5 files changed, 14 insertions(+), 14 deletions(-) diff --git a/NEWS b/NEWS index a218b5f..434f119 100644 --- a/NEWS +++ b/NEWS @@ -1,4 +1,4 @@ -Changes in 1.11.1 +Changes in 1.11.2 + further vignette cache improvements Changes in 1.11.1 diff --git a/R/constants.R b/R/constants.R index afe96c4..373e9ca 100644 --- a/R/constants.R +++ b/R/constants.R @@ -1,15 +1,15 @@ #' Output items #' #' A predefined list of mw_output_item objects. The items have been created to -#' mirror the Metabolomics Workbench API documentation output items as closely +#' mirror the Metabolomics Workbench API documentation output items as closely #' as possible. #' @examples #' # list available output_items #' names(output_item) -#' +#' #' # get the output item 'summary' #' output_item$summary -#' +#' #' @rdname output_item #' @include generics.R class_def.R parse_fcns.R #' @@ -19,15 +19,15 @@ output_item = list() #' Input items #' #' A predefined list of mw_input_item objects. The items have been created to -#' mirror the Metabolomics Workbench API documentation input items as closely +#' mirror the Metabolomics Workbench API documentation input items as closely #' as possible. #' @examples #' # list available input_items #' names(input_item) -#' +#' #' # get the input item 'study_id' #' input_item$study_id -#' +#' #' @rdname input_item #' @export input_item = list() @@ -35,15 +35,15 @@ input_item = list() #' Contexts #' #' A predefined list of mw_context objects. The context have been created to -#' mirror the metabolomics workbench API documentation contexts as closely +#' mirror the metabolomics workbench API documentation contexts as closely #' as possible. #' @examples #' # list available contexts #' names(context) -#' +#' #' # get the context 'study' #' context$study -#' +#' #' @rdname context #' @export context = list() @@ -66,7 +66,7 @@ context$compound = mw_context( input_items = c('regno','formula','inchi_key','lm_id','pubchem_cid', 'hmdb_id','kegg_id','chebi_id','metacyc_id','abbrev'), output_items = c('all','classification','molfile','png','compound_exact') -) +) context$refmet = mw_context( name = 'refmet', diff --git a/man/context.Rd b/man/context.Rd index db17b18..f6beb5f 100644 --- a/man/context.Rd +++ b/man/context.Rd @@ -12,7 +12,7 @@ context } \description{ A predefined list of mw_context objects. The context have been created to -mirror the metabolomics workbench API documentation contexts as closely +mirror the metabolomics workbench API documentation contexts as closely as possible. } \examples{ diff --git a/man/input_item.Rd b/man/input_item.Rd index 6be8570..bab4116 100644 --- a/man/input_item.Rd +++ b/man/input_item.Rd @@ -12,7 +12,7 @@ input_item } \description{ A predefined list of mw_input_item objects. The items have been created to -mirror the Metabolomics Workbench API documentation input items as closely +mirror the Metabolomics Workbench API documentation input items as closely as possible. } \examples{ diff --git a/man/output_item.Rd b/man/output_item.Rd index a0779aa..b73ab38 100644 --- a/man/output_item.Rd +++ b/man/output_item.Rd @@ -12,7 +12,7 @@ output_item } \description{ A predefined list of mw_output_item objects. The items have been created to -mirror the Metabolomics Workbench API documentation output items as closely +mirror the Metabolomics Workbench API documentation output items as closely as possible. } \examples{