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lines changed Original file line number Diff line number Diff line change @@ -39,7 +39,6 @@ Quick Start
3939
4040Surface Visualization
4141=====================
42-
4342.. code-block :: python
4443 import clabtoolkit.surfacetools as cltsurf
4544
@@ -53,29 +52,6 @@ Surface Visualization
5352 cmap = " jet" ,
5453 colorbar_position = " right" )
5554
56-
57- Working with FreeSurfer
58- =======================
59- .. code-block :: python
60-
61- import clabtoolkit.freesurfertools as cltfree
62-
63- # Get the FREESURFER_HOME environment variable
64- freesurfer_home = os.environ.get(' FREESURFER_HOME' )
65-
66- # Get the default subject directory
67- fs_subject_dir = os.path.join(freesurfer_home, ' subjects' )
68-
69- fs_fullid = ' bert'
70-
71- # Load the Subject object
72- subject = cltfree.FreeSurferSubject(fs_fullid, fs_subject_dir)
73-
74- # Print subject details
75- print (f " Subject ID: { subject.subj_id} " )
76- print (f " Subject Directory: " )
77- cltmisc.print_dict_tree(subject.fs_files)
78-
7955 API Reference
8056=============
8157
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