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New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (60 samples, 6 countries including Mexico) #2661
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Wrong repo i leave this here. in the case not growing i will close it as usual |
26 |
@aviczhl2 @corneliusroemer this is worth to be designated so i won't transfer it back to secondary repo |
41 |
54 |
60 |
no chance to survive closing it |
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Jn.1.16.1 > Orf1b:Q215K (C14110A) > S:S31del (Del21653-55)
![Screenshot 2024-06-19 alle 01 52 28](https://private-user-images.githubusercontent.com/87669813/340869252-f2e361e5-a2c3-4bd1-8998-8de401a23ad1.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.CEwihQo5ylJFhHe59PG09ytbwqXtVdHl3trC5mWw_M8)
Query: C14110A,del21653
Samples: 21 (Canada, England, US
Tree: [S:S31del is present in the S:A771S branch and in the ones with uploaded samples]
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice11_genome_test_4345d_2183f0.json?c=userOrOld&label=id:node_7083798
IDs:
EPI_ISL_19158673, EPI_ISL_19165120, EPI_ISL_19175973,
EPI_ISL_19177682, EPI_ISL_19177701, EPI_ISL_19186223,
EPI_ISL_19186270, EPI_ISL_19186528, EPI_ISL_19192671,
EPI_ISL_19194452, EPI_ISL_19194467, EPI_ISL_19194469,
EPI_ISL_19194483, EPI_ISL_19194496, EPI_ISL_19195949,
EPI_ISL_19197519, EPI_ISL_19198933, EPI_ISL_19199087,
EPI_ISL_19199090-19199091, EPI_ISL_19199103
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