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New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (60 samples, 6 countries including Mexico) #2661

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FedeGueli opened this issue Jun 18, 2024 · 7 comments

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@FedeGueli
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Jn.1.16.1 > Orf1b:Q215K (C14110A) > S:S31del (Del21653-55)
Query: C14110A,del21653
Samples: 21 (Canada, England, US
Tree: [S:S31del is present in the S:A771S branch and in the ones with uploaded samples]
Screenshot 2024-06-19 alle 01 52 28
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice11_genome_test_4345d_2183f0.json?c=userOrOld&label=id:node_7083798

IDs:
EPI_ISL_19158673, EPI_ISL_19165120, EPI_ISL_19175973,
EPI_ISL_19177682, EPI_ISL_19177701, EPI_ISL_19186223,
EPI_ISL_19186270, EPI_ISL_19186528, EPI_ISL_19192671,
EPI_ISL_19194452, EPI_ISL_19194467, EPI_ISL_19194469,
EPI_ISL_19194483, EPI_ISL_19194496, EPI_ISL_19195949,
EPI_ISL_19197519, EPI_ISL_19198933, EPI_ISL_19199087,
EPI_ISL_19199090-19199091, EPI_ISL_19199103

@FedeGueli
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Wrong repo i leave this here. in the case not growing i will close it as usual

@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (21 samples) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (26 samples) Jun 24, 2024
@FedeGueli
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26

@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (26 samples) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (28 samples) Jun 27, 2024
@FedeGueli FedeGueli reopened this Jun 29, 2024
@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (28 samples) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (32 samples) Jul 2, 2024
@FedeGueli
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@aviczhl2 @corneliusroemer this is worth to be designated so i won't transfer it back to secondary repo

@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (32 samples) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (41 samples) Jul 17, 2024
@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (41 samples) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (41 samples, 6 countries including Mexico) Jul 17, 2024
@FedeGueli
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41

@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (41 samples, 6 countries including Mexico) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (54 samples, 6 countries including Mexico) Jul 24, 2024
@FedeGueli
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54

@FedeGueli FedeGueli changed the title New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (54 samples, 6 countries including Mexico) New JN.1.16.1 plus S:S31del after Orf1b:Q215K (C14110A) (60 samples, 6 countries including Mexico) Jul 28, 2024
@FedeGueli
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60

@FedeGueli
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no chance to survive closing it

@FedeGueli FedeGueli closed this as not planned Won't fix, can't repro, duplicate, stale Aug 1, 2024
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