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JN.1+2-nuc Orf1b:I2273S+FLiRT (42 seqs, 7 countries) #2679

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xz-keg opened this issue Jul 2, 2024 · 2 comments
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JN.1+2-nuc Orf1b:I2273S+FLiRT (42 seqs, 7 countries) #2679

xz-keg opened this issue Jul 2, 2024 · 2 comments

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@xz-keg
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xz-keg commented Jul 2, 2024

From sars-cov-2-variants/lineage-proposals#1503

JN.1+T20285C,A20284T(Orf1b:I2273S)+G22599C,T22928C(S:R346T,F456L)

GISAID query:T20285C, A20284T, C18894T, G22599C,T22928C,-17334,-16741
No. of seqs: 33(Australia 1 Canada 10 UK 2 Singapore 1 USA 19 (3 from UK 1 from Italy))

First: EPI_ISL_18983833, USA from UK, 2024-3-4
Latest: EPI_ISL_19213679, UK, 2024-6-8

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85 seqs now
Is this branch worth to be designated?

@xz-keg xz-keg changed the title JN.1+2-nuc Orf1b:I2273S+FLiRT (33 seqs, 6 countries) JN.1+2-nuc Orf1b:I2273S+FLiRT (35 seqs, 6 countries) Jul 20, 2024
@xz-keg xz-keg changed the title JN.1+2-nuc Orf1b:I2273S+FLiRT (35 seqs, 6 countries) JN.1+2-nuc Orf1b:I2273S+FLiRT (36 seqs, 6 countries) Jul 25, 2024
@xz-keg xz-keg changed the title JN.1+2-nuc Orf1b:I2273S+FLiRT (36 seqs, 6 countries) JN.1+2-nuc Orf1b:I2273S+FLiRT (37 seqs, 6 countries) Jul 30, 2024
@xz-keg xz-keg changed the title JN.1+2-nuc Orf1b:I2273S+FLiRT (37 seqs, 6 countries) JN.1+2-nuc Orf1b:I2273S+FLiRT (39 seqs, 6 countries) Aug 4, 2024
@xz-keg
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xz-keg commented Aug 9, 2024

42, France

@xz-keg xz-keg changed the title JN.1+2-nuc Orf1b:I2273S+FLiRT (39 seqs, 6 countries) JN.1+2-nuc Orf1b:I2273S+FLiRT (42 seqs, 7 countries) Aug 9, 2024
@xz-keg xz-keg closed this as not planned Won't fix, can't repro, duplicate, stale Aug 15, 2024
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@xz-keg @DailyCovidCases