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## Workshop of 2 hours
Michal loves the idea
and also thinks that DeepDream is a really interesting topic
Thumbs up from organiser on DeepLearning idea
Not too worried about track selection, etc - all a work-in-progress
Plan
-- hand out VMs on sticks
NN intro
chain rule
demo with convnet.js cat picture
supervised learning
demo with convnet.js MNIST
network configurations
MLP
CNN
RNN
merits of various software frameworks
direct programming
meta-programming
meta-meta-programming
Concurrent with workshop hands-on:
explain frontiers (eg: Futurists talk)
Concurrent with workshop hands-on:
merits of various software frameworks
convnet.js (!)
caffe (C++)
python
torch
lua
theano (Python)
python, GPU + CPU
tensorflow (C++)
python and C++, GPUs + CPUs
ease-of-use layers
keras
lasagne
tensorflow-slim
TODO demo of tensorboard
IDEA : show tensorboard for MNIST ++ ?
demo of Lasagne for MNIST MLP
DONE
demo of Lasagne for MNIST CNN
DONE
demo of VM for ImageNet recognition
WORKS: lasagne can load+run Inception3 in Jupyter inside 2Gb RAM
Picture of inception3 network included in : https://github.com/google/inception/blob/master/inception.ipynb
Added to presentation
Commerce section
demo of VM with ImageNet / cutoff == 'commercial'
WORKS : logistic regression of several car images
Art section : Intro : http://fastml.com/deep-nets-generating-stuff/
demo of VM with style-transfer == 'art'
Lasagne : (theano ~ secs per iteration) ~600Mb peak memory
https://github.com/Lasagne/Recipes/blob/master/examples/styletransfer/Art%20Style%20Transfer.ipynb
==?== (lasagne ~deep-forger): http://www.kdnuggets.com/2015/12/deep-learning-art-forgery.html
TEST : Can this be run in reasonable time?
TEST : Does this look Ok with Inception3?
http://ostagram.ru/static_pages/lenta?last_days=30
-> https://www.facebook.com/ostagram/
?demo of VM with deep dream == 'art'
Original Google article (Caffe) :
https://github.com/google/deepdream/blob/master/dream.ipynb
?TEST : Can this be run in reasonable time
Keras : (tensorflow backend ~ 70secs, ~1.1Gb peak RAM, theano ~ 570secs per iteration, ~?350Mb peak RAM)
https://github.com/fchollet/keras/blob/master/examples/deep_dream.py
:: http://i.imgur.com/FX6ROg9.jpg
?TEST : Does this look Ok with Inception3?
Lasagne :
https://github.com/317070/Twitch-plays-LSD-neural-net
== https://317070.github.io/Dream/
demo of LSTM word thingy
IMPLEMENT : Need suitable text data
TEST : Can this be run in reasonable time?
https://github.com/ebenolson/pydata2015/blob/master/4%20-%20Recurrent%20Networks/RNN%20Character%20Model%20-%202%20Layer.ipynb
xgit : Recipes : examples : lstm_text_generation.py
Problem : Takes too long to train...
Alternative RNN ideas:
http://jiwonkim.org/awesome-rnn/
Word Embedding
Arguable whether it's really Deep Learning
OTOH, it is a 'learned layer' that has arisen from DL research
Either : Need word corpus (and patience)
Or : Precalculated vectors
Deep Q-Learning
https://cs.stanford.edu/people/karpathy/convnetjs/demo/rldemo.html
http://maciejjaskowski.github.io/2016/03/09/space-invaders.html
https://github.com/maciejjaskowski/deep-q-learning
-- theano / lasagne
-- needs non-free Atari ROM image
https://github.com/yandexdataschool/AgentNet
### Topics within Deep Learning
#### ConvNets:
Pros
More materials available
Different angles : Art, Commerce
Can do some simple 'real' training (MNIST)
Can also use pre-built model (ImageNet / Inception-3)
Cons
'Simple stuff'
Overlap with potential customers?
Google DeepDreaming may not be ready : CHECK THIS
Ideas for progression :
Stanford Seminar - Oriol Vinyals of Google
https://youtu.be/UAq961jQjYg
#### RNNs / NLP:
Pros
More similar to current work
Cons
Difficult to set up satisfying motivation / experiments
#### Reinforcement Learning:
Pros
Go = VerySexy
Cons
Not so clearly 'deep learning'
Very Difficult to set up satisfying motivation / experiments
Someone else might do it...
More generally
JS in the browser :
Pros
CPU-only
Single-threaded
Avoids thumb-drive distribution
Cons
Not Python
No GPU or multi-core - though this is (basically) same as with VM or docker
Not iPython
Code
https://github.com/karpathy/convnetjs
https://github.com/karpathy/reinforcejs
There is a new paper in regards to deep reinforcements learning in continous spaces by deepmind.
Continuous control with deep reinforcements learning. Is there plans to add this in code form. Many thanks Andrew.
http://cs.stanford.edu/people/karpathy/convnetjs/demo/image_regression.html
Cat picture reconstruction
http://cs.stanford.edu/people/karpathy/convnetjs/demo/mnist.html
MNIST
iPython as a GUI
https://github.com/donnemartin/data-science-ipython-notebooks
Deep Dream (Caffe)
https://github.com/donnemartin/data-science-ipython-notebooks/blob/master/deep-learning/deep-dream/dream.ipynb
http://googleresearch.blogspot.sg/2015/07/deepdream-code-example-for-visualizing.html
http://www.pyimagesearch.com/2015/07/06/bat-country-an-extendible-lightweight-python-package-for-deep-dreaming-with-caffe-and-convolutional-neural-networks/#show_and_tell
https://github.com/jrosebr1/bat-country/blob/master/demo.py
Tensorflow in iPython notebook :
https://github.com/pkmital/tensorflow_tutorials
MNIST:
https://github.com/pkmital/tensorflow_tutorials/blob/master/notebooks/05_basic_convnet.ipynb
TensorFlow
https://github.com/donnemartin/data-science-ipython-notebooks/blob/master/deep-learning/tensor-flow-exercises/5_word2vec.ipynb
Google Inception network notebooks :
https://github.com/google/inception
Keras on TensorFlow (descriptions)
* http://blog.keras.io/how-convolutional-neural-networks-see-the-world.html
* TensorFlow backend for Keras is pretty functional :
* http://blog.keras.io/keras-now-running-on-tensorflow.html
Keras MNIST:
* 98.40 : https://github.com/fchollet/keras/blob/master/examples/mnist_mlp.py
* 99.25 : https://github.com/fchollet/keras/blob/master/examples/mnist_cnn.py
Keras MNIST transfer learning :
* Learn features on {0,1,2,3,4} and then fine tune final dense layers against {5,6,7,8,9}
* https://github.com/fchollet/keras/blob/master/examples/mnist_transfer_cnn.py
Keras may have problems importing VGG16 into TensorFlow:
* https://github.com/fchollet/keras/issues/1135
Show VGG16 layers :
* https://github.com/fchollet/keras/blob/master/examples/conv_filter_visualization.py
Something akin to DeepDream using Keras on TensorFlow :: Keras
* https://github.com/fchollet/keras/blob/master/examples/deep_dream.py
Neural Style transfer :
* https://github.com/fchollet/keras/blob/master/examples/neural_style_transfer.py
MAY BE PROBLEMATIC : Code in C++
How to Classify Images with TensorFlow
* http://googleresearch.blogspot.sg/2015/12/how-to-classify-images-with-tensorflow.html
* C++ Source :: https://github.com/tensorflow/tensorflow/tree/master/tensorflow/examples/label_image
How to Classify Images with TensorFlow (Python - but may be memory intensive, see below)
* Python : https://github.com/tensorflow/models/tree/master/inception
* Includes their library 'tf-slim'
* Also : https://github.com/tensorflow/models/blob/master/inception/inception/inception_eval.py
MAY BE PROBLEMATIC : Involves retraining Inception
Train your own image classifier with Inception in TensorFlow
* http://googleresearch.blogspot.sg/2016/03/train-your-own-image-classifier-with.html
* Python : https://github.com/tensorflow/models/tree/master/inception
* Includes their library 'tf-slim'
* Also : https://github.com/tensorflow/models/blob/master/inception/inception/inception_eval.py
* Note that the entire model architecture is predicated on a 299x299 image,
* thus if you wish to change the input image size, then you may need to redesign the entire model architecture.
* We have tuned the model to employ about ~40GB of CPU memory. Thus, having access to 64 or 128 GB of CPU memory would be ideal.
* We targeted a desktop with 128GB of CPU ram connected to 8 NVIDIA Tesla K40 GPU cards
* but we have run this on desktops with 32GB of CPU ram and 1 NVIDIA Tesla K40.
MAY BE PROBLEMATIC :
Image Analogies using Neural Networks (github.com) :: Keras
* HN : https://news.ycombinator.com/item?id=11234793
* Paper : https://github.com/awentzonline/image-analogies/
* Similiar code : https://github.com/fchollet/keras/blob/master/examples/neural_style_transfer.py
* http://ostagram.ru/static_pages/lenta?last_days=30
* http://deepart.io/
* Our algorithm uses a neural network based on the 19-layer VGG network by Karen Simonyan and Andrew Zisserman.
* University of Tübingen has a pending patent application for the Neural Art technology.
* There's also this: https://http://deepart.io/ - Not sure if it's the same thing but makes interesting pictures.
* According to their about page, that site is using this algorithm http://arxiv.org/pdf/1508.06576.pdf
* whereas neural-image-analogies is a combination of http://www.mrl.nyu.edu/projects/image-analogies/index.html and http://arxiv.org/pdf/1601.04589v1.pdf
* Basically you can do a few other things with image analogies, such as texture-by-numbers, that the neural style algo doesn't cover.
* In addition, the matching and blending covered in the Li and Wand paper provides more accurate style details.
* Problem with image patches in image-analogies ::
* The current code uses images2neibs from theano to generate the image patches.
* https://github.com/awentzonline/image-analogies/issues/3
* This could be hugely simplified if patch_size==1
MAY BE PROBLEMATIC :
Turn your two-bit doodles into fine artworks with deep neural networks
* https://news.ycombinator.com/item?id=11257566
* https://github.com/alexjc/neural-doodle
* For details, the research paper is linked on the GitHub page: http://arxiv.org/abs/1603.01768
* For a video and higher-level overview see my article from yesterday: http://nucl.ai/blog/neural-doodles/
* It's a pre-trained network on image classification dataset from 2014 called ImageNet.
* The network is called VGG, paper is here: http://arxiv.org/abs/1409.1556
* There's no additional training apart from that.
* The neural network is used to extract patterns (grain/texture/style)
* and a separate optimization tries to reproduce them as appropriate.
* Also uses theano-only function:
* patches = theano.tensor.nnet.neighbours.images2neibs(f, (size, size), (stride, stride), mode='valid')
neural-style :: Torch
* https://github.com/jcjohnson/neural-style
AlphaGo : reimplementation in Kerase / theano (/ tensorflow?)
* https://github.com/Rochester-NRT/AlphaGo
Models
Model Zoo ideas:
https://groups.google.com/a/tensorflow.org/forum/m/#!topic/discuss/BKOiAgKDxqM
But decent ImageNet model is ~60Mb => need ThumbDrives
Inception 3 :
https://www.tensorflow.org/versions/master/tutorials/image_recognition/index.html
Inception 3 / Deep Dream = Coming soon (bottom of page) :
https://www.tensorflow.org/versions/master/tutorials/index.html
Caffe :
http://caffe.berkeleyvision.org/gathered/examples/imagenet.html
Lasagne :
https://github.com/Lasagne/Recipes/tree/master/modelzoo
https://github.com/alexjc/neural-doodle
download this pre-trained neural network (VGG19, 80Mb)
Microsoft Deep Residual Networks (with models, and Lasagne version link)
https://github.com/KaimingHe/deep-residual-networks
https://github.com/Lasagne/Recipes/tree/master/papers/deep_residual_learning
Using Caffe models in Lasagne
https://github.com/Lasagne/Lasagne/issues/157
VGG16 model for Keras
https://gist.github.com/baraldilorenzo/07d7802847aaad0a35d3
VGG16 model for Lasagne
model : https://github.com/Lasagne/Recipes/blob/master/modelzoo/vgg16.py
weights : https://s3.amazonaws.com/lasagne/recipes/pretrained/imagenet/vgg16.pkl
See also : https://github.com/Lasagne/Recipes/issues/20
VGG16 model in Tensorflow-slim
https://github.com/tensorflow/models/blob/master/inception/inception/slim/README.md
Lasagne Recipes Examples :
drwxrwxr-x. 2 andrewsm andrewsm 4096 Mar 14 17:53 styletransfer
VGG19 80Mb network (this must be a cut-off version)
-rw-rw-r--. 1 andrewsm andrewsm 970738 Mar 14 17:53 ImageNet Pretrained Network (VGG_S).ipynb
393Mb network (VGG_CNN_S) HUGE
IMPLEMENT : Do the same with Inception3?
-rw-rw-r--. 1 andrewsm andrewsm 68760 Mar 14 17:53 Using a Caffe Pretrained Network - CIFAR10.ipynb
Small CIFAR10 network (pickled version is ~10Mb only, and workbook includes model definition)
-rw-rw-r--. 1 andrewsm andrewsm 10805 Mar 14 17:53 lstm_text_generation.py
Like Karpathy example
drwxrwxr-x. 2 andrewsm andrewsm 4096 Mar 14 17:53 variational_autoencoder
-rw-rw-r--. 1 andrewsm andrewsm 165138 Mar 14 17:53 Video features with C3D.ipynb
-rw-rw-r--. 1 andrewsm andrewsm 1043040 Mar 14 17:53 Saliency Maps and Guided Backpropagation.ipynb
-rw-rw-r--. 1 andrewsm andrewsm 72414 Mar 14 17:53 spatial_transformer_network.ipynb
Lasagne Recipes ModelZoo :
-rw-rw-r--. 1 andrewsm andrewsm 4807 Mar 14 17:53 googlenet.py :: 27Mb for full model (unrestricted)
-rw-rw-r--. 1 andrewsm andrewsm 7308 Mar 14 17:53 inception_v3.py :: 91Mb for full model (Apache) (299x299 RGB uint8 input)
-rw-rw-r--. 1 andrewsm andrewsm 2544 Mar 14 17:53 vgg16.py :: 528Mb for full model (non-commercial)
-rw-rw-r--. 1 andrewsm andrewsm 2817 Mar 14 17:53 vgg19.py :: 548Mb for full model (non-commercial)
-rw-rw-r--. 1 andrewsm andrewsm 2898 Mar 14 17:53 vgg_cnn_s.py :: 393Mb for full model (non-commercial)
-rw-rw-r--. 1 andrewsm andrewsm 6382 Mar 14 17:53 c3d.py :: AlexNet for 3d processing (video)
-rw-rw-r--. 1 andrewsm andrewsm 9779 Mar 14 17:53 caffe_reference.py
-rw-rw-r--. 1 andrewsm andrewsm 2572 Mar 14 17:53 cifar10_nin.py :: 11Mb for full model (unknown)
How about building the tensorflow inception-3 graph and saving it for viewing by TensorBoard?
Other courses
Udacity course from Google
https://www.udacity.com/course/deep-learning--ud730
Lesson 1: From Machine Learning to Deep Learning
Lesson 2: Deep Neural Networks
Lesson 3: Convolutional Neural Networks
Lesson 4: Deep Models for Text and Sequences
Other peoples'
http://www.slideshare.net/roelofp/deep-learning-as-a-catdog-detector
### Foundation : Python (based in Jupyter)
Potential Toolsets :
* TensorFlow + Keras? (requires more work)
* Theano + Lasagne (standing on head, but doesn't have TensorBoard, which would be sexy)
Cannot rely on people having appropriate GPU installation (TensorFlow is particularly fussy version-wise).
Therefore, must resign ourselves to CPU-based training.
Decision : Run VirtualBox VMs
## How to implement workshop practicals
Running iPython / Jupyter
* http://blog.ouseful.info/2014/12/12/seven-ways-of-running-ipython-notebooks/
* http://blog.ouseful.info/2015/05/18/kiteflying-around-containers-a-better-alternative-to-course-vms/
* https://github.com/docker/kitematic (docker container manager for VirtualBox VM - but Not For Linux => disqualified)
Host the VM on a central server?
* http://lambdaops.com/ipythonjupyter-tmpnb-debuts/
* Problem : CPU usage is high - so 10 people logged in would probably bring a single host to its knees
Alternative : AWS GPU instance
* How to install Theano on Amazon EC2 GPU instances for deep learning
* Has prebuilt AMI too : The current one is ami-b141a2f5 (the updated one at the top of the post). You can always search Theano - CUDA 7 as its name.
* NOw : ami-1f3e225a
* http://markus.com/install-theano-on-aws/
* Requirement : g2.2xlarge On-Demand Instances
* g2.2xlarge : GRID K520 gpu
* Pricing :
* vCPU ECU Memory (GiB) Instance Storage (GB) Linux/UNIX Usage
* g2.2xlarge 8 26 15 60 SSD $0.65 per Hour
* g2.8xlarge 32 104 60 2 x 120 SSD $2.60 per Hour
* Import of existing VMs
* Verify that your VM satisfies the prerequisites for VM Import, prepare it for import,
and export it from its current environment as an OVA file (or VMDK, VHD, or RAW).
## Vagrant
This project provides a Ubuntu (14.04) Vagrant Virtual Machine (VM) with the TensorFlow library from Google and IPython (now know as Jupyter) notebooks using vagrant :
* https://github.com/gavinln/tensorflow-ipy
Python-dev vagrant configuration :
* https://github.com/AnthonyNystrom/python-dev-bootstrap
* https://datascience.berkeley.edu/data-science-vagrant-ipython-notebook/
* Except that :
* vagrant still requires people to have VirtualBox installed.
* vagrant downloads 320Mb disk images - which would over-burden the network, and take 20mins
* ... So : Much more reasonable to distribute VirtualBox VM images on USB ...
* Alternative : Vagrant
* https://developer.fedoraproject.org/tools/vagrant/vagrant-virtualbox.html
* https://www.vagrantup.com/
* This was how the Spark environment for the edX course was done... Perhaps the vagrant(?) files exist?
* Explicit instructions for building fedora environment that runs self-contained:
* https://rwmj.wordpress.com/2013/10/27/using-virt-builder-to-build-packages/
## VirtualBox images
VirtualBox images are pretty portable...
* If we only need iPython with all the imports, don't need to worry about editor, etc
* could also do it without installing X - and running the browser session in the host machine...
Background :
* Fedora minimal VM building :
* https://developer.fedoraproject.org/tools/virt-builder/about.html
* http://libguestfs.org/virt-builder.1.html
* https://kashyapc.fedorapeople.org/virt/virt-builder-usage.txt
* https://spin.atomicobject.com/2013/06/03/ovf-virtual-machine/
* qemu-img – Part of the QEMU project, qemu-img is the holy grail, Swiss Army knife of disk image conversion. If you need to convert a disk image, check here first.
* http://docs.openstack.org/image-guide/convert-images.html#qemu-img-convert-raw-qcow2-qed-vdi-vmdk-vhd
* Creating something bootable by VirtualBox
* https://github.com/devrandom/gitian-builder#virtualbox-1
* (not yet...)
* https://getfedora.org/en/cloud/download/index.html
* "Base Cloud Images for Vagrant" : "VirtualBox Image"
* https://www.packer.io/intro/index.html
* OVF exports for VirtualBox?
* VirtualBox VDI file?
* http://virtuallyhyper.com/2013/06/migrate-from-libvirt-kvm-to-virtualbox/
* Sadly, the virt-convert tool no longer supports the -o vmx option.
* It looks like you might have to just use the old version:
* Might want to state right at the beginning that this requires VMware installed and isn't any use if you don't!
* ovftool is free, you just have to create a myVMware account.
* The registration for a MyVMWare account is also free, you just need a valid email address.
* Have you tried registering for a MyVMware account?
* http://it-ovid.blogspot.sg/2012/10/virtual-box-headless-cheatsheet.html
* Import VMWare disk images
* VBoxManage convertfromraw --format vmdk --variant Standard <source>.vmdk <destination>.vdi
* This was suggested by Kai Hendry as being very do-able
* Also ... VirtualBox is capable of importing and exporting virtual machines in the standard Open Virtualization Format (OVF).
* [How To] Headless VirtualBox on Headless Server
* https://forums.virtualbox.org/viewtopic.php?f=7&t=60681
* Just a note: exporting a VM will change internal IDs for both the VM virtual motherboard and the disks.
* This will typically break a grub/fstab config in Linux and possibly trigger again activation on Windows.
* Copying the VM directly really is the proper way of doing it.
* Exporting should be a last resort thing.
Successful installers could also open up their 'server' to access via WiFi, without risk :
* https://nsrc.org/workshops/2014/btnog/raw-attachment/wiki/Track2Agenda/ex-virtualbox-portforward-ssh.htm
* https://www.reddit.com/r/IPython/comments/3gw3e5/how_to_access_to_the_ipython_server_from_a/
GPU?
* unfortunately VM solution probably doesn't allow for GPU anyway :
* https://github.com/BVLC/caffe/issues/2749
## What environment to use?
VPS? expense...
TensorFlow + iPython + VM
https://github.com/gavinln/tensorflow-ipy
http://stackoverflow.com/questions/33784214/how-to-test-tensorflow-cifar10-cnn-tutorial-model?rq=1
Thumb drive ideas:
http://www.aliexpress.com/item/USB-3-0-3000-style-Cartoon-Usb-Flash-Drive-4GB-8GB-16GB-32GB-Pen-Drive-100pcs/32500540806.html
Utilitarian:
http://www.aliexpress.com/item/Usb-flash-drive-Smart-Phone-OTG-Pendrive-Pen-Drive-32GB-16GB-8GB-4GB-Memory-stick-mini/32462761490.html
Cat-themed:
Claw:
http://www.aliexpress.com/item/Cute-Cat-Claw-Usb-Flash-Drive-USB-2-0-pen-drive-64GB-32GB-16GB-Pendrive-8GB/32593071579.html
http://www.aliexpress.com/item/Usb-flash-drive-4gb-8gb-16gb-32gb-cat-s-claw-usb-pendrive-gift-u-disk-memory/32424298881.html
Metal:
http://www.aliexpress.com/item/Wholesale-and-custom-Cat-model-of-metal-gift-art-creative-personality-key-usb-flash-drive-16gb/32323841251.html
3D:
http://www.aliexpress.com/item/Free-Shipping-cartoon-pen-drive-kitty-cat-flash-memory-stick-pendrive-1GB-64GB/2038130430.html
http://www.aliexpress.com/item/Plastic-cartoon-baby-hello-kitty-cat-USB-Flash-Drives-thumb-pen-drives-memory-stick-2G-4GB/1024940593.html
Flat:
http://www.aliexpress.com/item/Cartoon-Animal-Flat-Cat-Style-4GB-8GB-16GB-32GB-USB-2-0-Flash-Drive-Pen-Drive/32372039038.html
Engraved
http://www.aliexpress.com/item/Creative-Crystal-Transparent-LED-With-Volkswagen-s-VW-Logo-2GB-32GB-USB-Flash-2-0-Memory/1406199398.html
http://www.aliexpress.com/item/10PCS-LOT-Wooden-USB-with-gift-box-2GB-32GB-USB-2-0-Flash-Memory-USB-flash/32221529820.html
http://www.aliexpress.com/item/Brand-New-Wooden-Maple-Personalized-LOGO-USB-2-0-Memory-flash-stick-pen-drive-with-metal/32412131258.html
http://www.aliexpress.com/item/Wooden-USB-Flash-Drive-32GB-16GB-8GB-4GB-Custom-Logo-Engraving-USB-2-0-flash-disk/32573215831.html
docker images?
GPU would be tricky to use, and there's no OS-independence
http://stackoverflow.com/questions/25185405/using-gpu-from-a-docker-container
https://github.com/NVIDIA/nvidia-docker
Can run on windows (it essentially builds on top of a Virtualized Linux environment)
https://docs.docker.com/engine/installation/windows/
USB Live environments?
Squid caching of RPM downloads?
http://serverascode.com/2014/03/29/squid-cache-yum.html
virt-builder cache location
https://rwmj.wordpress.com/2014/09/11/creating-a-local-virt-builder-repository/