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HED standard support #163

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7 tasks
yarikoptic opened this issue Oct 28, 2024 · 0 comments
Open
7 tasks

HED standard support #163

yarikoptic opened this issue Oct 28, 2024 · 0 comments
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enhancement New feature or request

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@yarikoptic
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Summary of items for development (after conversation with HED group, attn @VisLab) to introduce support for HED annotations within DANDI to be done across various components of the platform

  • facilitate finalization/release of ndx-events with HED support
  • NWB -> _events.tsv export for BEP032 (part of nwb2bids)
  • develop sample use case dandisets
    • some from Allen Institute following ongoing
    • add HED to WiP neuropixels BEP032 BIDS dataset from @vandermeerlab (attn @manimoh @mvdm)
    • any other?
  • add extraction of HED into dandiset summary stats similarly to how done for NIMAR, see e.g. https://nemar.org/dataexplorer/detail?dataset_id=ds005505

After we have good examples

  • add support to neurosift (attn @magland), e.g.
    • navigation of different types of events
    • potentially simple analysis of peri stimuli for different conditions neatly annotated using HED
  • add to faceted search (@dandi/archive-maintainers)
@yarikoptic yarikoptic added the enhancement New feature or request label Oct 28, 2024
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