.pre-commit-config.yaml

# See https://pre-commit.com for more information
# See https://pre-commit.com/hooks.html for more hooks
# Run 'pre-commit autoupdate' to update hook versions
repos:
  - repo: https://github.com/kynan/nbstripout
    rev: 0.7.1
    hooks:
      - id: nbstripout
        name: nbstripout - Strip outputs from notebooks (auto-fixes)
        args:
          - --extra-keys
          - "metadata.colab metadata.kernelspec cell.metadata.colab cell.metadata.executionInfo cell.metadata.id cell.metadata.outputId"
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.5.0
    hooks:
      - id: check-added-large-files
        name: Check for files larger than 5 MB
        args: [ "--maxkb=5120" ]
      - id: end-of-file-fixer
        name: Check for a blank line at the end of scripts (auto-fixes)
        exclude: '\.Rd'
      - id: trailing-whitespace
        name: Check for trailing whitespaces (auto-fixes)
  - repo: https://github.com/astral-sh/ruff-pre-commit
    # Ruff version.
    rev: v0.3.0
    hooks:
      # Run the linter.
      - id: ruff
        args: [ --fix ]
      # Run the formatter.
      - id: ruff-format
  - repo: https://github.com/Yelp/detect-secrets
    rev: v1.4.0
    hooks:
      - id: detect-secrets
        name: detect-secrets - Detect secrets in staged code
        args: [ "--baseline", ".secrets.baseline", '--exclude-files', '.*\.(ipynb|qmd)$',  ]
        exclude: .*/tests/.*|^\.cruft\.json$
      - id: detect-secrets
        name: 'detect-secrets-jupyter'
        args: ['--exclude-files', '.*[^i][^p][^y][^n][^b]$', '--exclude-lines', '"(hash|id|image/\w+)":.*', ]