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README
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Illumina (Hiseq, MiSeq, GA) Sequencing Instruments Tracking
===========================================================
lib directory:
---------------
npg:: - web application
npg_tracking:: - general definition
access to genomic references and other reference data
API for extended Illumina rundolder structure
DBIx binding to the tracking database
st::api:: - perl binding to LIMS XML feeds
Monitor:: - monitoring runfolders on staging servers up to the analysis stage
npg_testing:: - supplimentary modules for testing
bin directory:
--------------
perl scripts
cgi-bin directory
-----------------
cgi scripts for the web app
scripts
-------
supplimentary scripts
htdocs directory:
-----------------
images and client-side scripts for the web app
data directory:
---------------
templates for the web app and some cron jobs
db config file for the web app
some icons
db schema dump
wtsi_local directory
--------------------
Apache web server config file
t directory:
------------
tests
test data
supplimentary scripts and modules for testing