Failed to import graphbolt due to `libgraphbolt_pytorch_2.3.0.post300.so` #7438

Rhett-Ying · 2024-05-30T03:38:48Z

🐛 Bug

Somehow post300 is appended for the target so name which results in failure to find it as the expected name is libgraphbolt_pytorch_2.3.0.so.
See more details in https://discuss.dgl.ai/t/filenotfounderror-cannot-find-dgl-c-graphbolt-library-in-dgl-2-2-1-and-pytorch-2-3-0/4419

To Reproduce

Steps to reproduce the behavior:

conda install DGL package for torch 2.3.0.

Expected behavior

Environment

DGL Version (e.g., 1.0): DGL 2.2.1
Backend Library & Version (e.g., PyTorch 0.4.1, MXNet/Gluon 1.3): PyTorch 2.3.0
OS (e.g., Linux):
How you installed DGL (conda, pip, source):
Build command you used (if compiling from source):
Python version:
CUDA/cuDNN version (if applicable):
GPU models and configuration (e.g. V100):
Any other relevant information:

Additional context

The text was updated successfully, but these errors were encountered:

alexbarghi-nv · 2024-06-06T22:10:31Z

I'm also seeing this bug - any update?

Rhett-Ying · 2024-06-07T00:17:44Z

This issue is not handled yet.

alexbarghi-nv · 2024-06-07T18:27:58Z

I think I've partly figured out the source of this bug - I tried installing again with PyTorch from the pytorch channel instead of conda-forge and that resolved the issue. There's probably a different version string or something similar in the conda-forge distribution which is causing this.

Davidxswang · 2024-06-09T03:27:13Z

I am also see this bug, installed dlg from pip, 2.2.1+cu121, for torch 2.2.2+cu121. Also tried for torch 2.3.x, not working.

Rhett-Ying · 2024-06-13T00:43:47Z

I am also see this bug, installed dlg from pip, 2.2.1+cu121, for torch 2.2.2+cu121. Also tried for torch 2.3.x, not working.

Did you install torch with pip or conda from conda-forge?

Rhett-Ying · 2024-06-13T02:31:37Z

Seems it's a common issue, we could add a reg check when loading graphbolt.

Davidxswang · 2024-06-13T03:54:07Z

I am also see this bug, installed dlg from pip, 2.2.1+cu121, for torch 2.2.2+cu121. Also tried for torch 2.3.x, not working.

Did you install torch with pip or conda from conda-forge?

I installed torch with pip

Rhett-Ying · 2024-06-13T08:41:06Z

@Davidxswang could you share your pip install command? and what is the version if check with pip list|grep torch and torch.__version__ in your case?

Davidxswang · 2024-06-13T17:43:30Z

@Davidxswang could you share your pip install command? and what is the version if check with pip list|grep torch and torch.__version__ in your case?

pip install torch==2.2.2 torchvision==0.17.2 torchaudio==2.2.2 --index-url https://download.pytorch.org/whl/cu121

pytorch-lightning            2.2.1
torch                        2.2.2+cu121
torch_geometric              2.5.2
torchaudio                   2.2.2+cu121
torchdata                    0.7.1
torchmetrics                 1.3.2
torchvision                  0.17.2+cu121

In [2]: torch.__version__
Out[2]: '2.2.2+cu121'

Silhouettes-of-U · 2024-06-14T07:06:31Z

I got a similar error while without post300 appended:

  File "<stdin>", line 1, in <module>
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/__init__.py", line 16, in <module>
    from . import (
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/__init__.py", line 13, in <module>
    from .dataloader import *
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/dataloader.py", line 27, in <module>
    from ..distributed import DistGraph
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/__init__.py", line 5, in <module>
    from .dist_graph import DistGraph, DistGraphServer, edge_split, node_split
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/dist_graph.py", line 11, in <module>
    from .. import backend as F, graphbolt as gb, heterograph_index
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/__init__.py", line 36, in <module>
    load_graphbolt()
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/__init__.py", line 26, in load_graphbolt
    raise FileNotFoundError(
FileNotFoundError: Cannot find DGL C++ graphbolt library at /root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/libgraphbolt_pytorch_2.3.1.so```

rfrs · 2024-06-14T07:58:08Z

` File "", line 1, in
File "/root/miniconda3/lib/python3.8/site-packages/dgl/init.py", line 16, in
from . import (
File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/init.py", line 13, in
from .dataloader import *
File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/dataloader.py", line 27, in
from ..distributed import DistGraph
File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/init.py", line 5, in
from .dist_graph import DistGraph, DistGraphServer, edge_split, node_split
File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/dist_graph.py", line 11, in
from .. import backend as F, graphbolt as gb, heterograph_index
File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/init.py", line 36, in
load_graphbolt()
File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/init.py", line 26, in load_graphbolt
raise FileNotFoundError(
FileNotFoundError: Cannot find DGL C++ graphbolt library at /root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/libgraphbolt_pytorch_2.3.1.so````

We are also facing the same issue with version 2.3.1.
Any progresses? Thank you

Rhett-Ying · 2024-06-14T08:22:50Z

I got a similar error while without post300 appended:

  File "<stdin>", line 1, in <module>
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/__init__.py", line 16, in <module>
    from . import (
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/__init__.py", line 13, in <module>
    from .dataloader import *
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/dataloading/dataloader.py", line 27, in <module>
    from ..distributed import DistGraph
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/__init__.py", line 5, in <module>
    from .dist_graph import DistGraph, DistGraphServer, edge_split, node_split
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/distributed/dist_graph.py", line 11, in <module>
    from .. import backend as F, graphbolt as gb, heterograph_index
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/__init__.py", line 36, in <module>
    load_graphbolt()
  File "/root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/__init__.py", line 26, in load_graphbolt
    raise FileNotFoundError(
FileNotFoundError: Cannot find DGL C++ graphbolt library at /root/miniconda3/lib/python3.8/site-packages/dgl/graphbolt/libgraphbolt_pytorch_2.3.1.so```

This is expected as DGL 2.2 does not support torch 2.3.1 yet. The latest supported torch version is 2.3.0

Rhett-Ying · 2024-06-14T08:23:13Z

@rfrs This is expected as DGL 2.2 does not support torch 2.3.1 yet. The latest supported torch version is 2.3.0

jbm-composer · 2024-06-26T19:24:38Z

I installed using the 2.3.x version, cuda 12.1, conda (from the DGL website), with torch 2.3.0, and I'm seeing:

>>> import dgl
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/james/src/jbm/dgl/python/dgl/__init__.py", line 16, in <module>
    from . import (
  File "/home/james/src/jbm/dgl/python/dgl/dataloading/__init__.py", line 13, in <module>
    from .dataloader import *
  File "/home/james/src/jbm/dgl/python/dgl/dataloading/dataloader.py", line 27, in <module>
    from ..distributed import DistGraph
  File "/home/james/src/jbm/dgl/python/dgl/distributed/__init__.py", line 5, in <module>
    from .dist_graph import DistGraph, DistGraphServer, edge_split, node_split
  File "/home/james/src/jbm/dgl/python/dgl/distributed/dist_graph.py", line 12, in <module>
    from .. import backend as F, graphbolt as gb, heterograph_index
  File "/home/james/src/jbm/dgl/python/dgl/graphbolt/__init__.py", line 36, in <module>
    load_graphbolt()
  File "/home/james/src/jbm/dgl/python/dgl/graphbolt/__init__.py", line 26, in load_graphbolt
    raise FileNotFoundError(
FileNotFoundError: Cannot find DGL C++ graphbolt library at /home/james/src/jbm/dgl/python/dgl/graphbolt/libgraphbolt_pytorch_2.3.0.so

I tried with conda sourcing from both conda-forge and pytorch, btw

I also (just) tried uninstalling 2.3.x and install 2.2.x, but same error:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/james/src/jbm/dgl/python/dgl/__init__.py", line 16, in <module>
    from . import (
  File "/home/james/src/jbm/dgl/python/dgl/dataloading/__init__.py", line 13, in <module>
    from .dataloader import *
  File "/home/james/src/jbm/dgl/python/dgl/dataloading/dataloader.py", line 27, in <module>
    from ..distributed import DistGraph
  File "/home/james/src/jbm/dgl/python/dgl/distributed/__init__.py", line 5, in <module>
    from .dist_graph import DistGraph, DistGraphServer, edge_split, node_split
  File "/home/james/src/jbm/dgl/python/dgl/distributed/dist_graph.py", line 12, in <module>
    from .. import backend as F, graphbolt as gb, heterograph_index
  File "/home/james/src/jbm/dgl/python/dgl/graphbolt/__init__.py", line 36, in <module>
    load_graphbolt()
  File "/home/james/src/jbm/dgl/python/dgl/graphbolt/__init__.py", line 26, in load_graphbolt
    raise FileNotFoundError(
FileNotFoundError: Cannot find DGL C++ graphbolt library at /home/james/src/jbm/dgl/python/dgl/graphbolt/libgraphbolt_pytorch_2.3.0.so

Livvi · 2024-07-08T13:28:22Z

Are there any news on this? I'm also currently failing to set up the dgl library and always get the same DGL C++ graphbolt library error shown above..

Rhett-Ying · 2024-07-18T05:29:19Z

Are there any news on this? I'm also currently failing to set up the dgl library and always get the same DGL C++ graphbolt library error shown above..

could you list what files exist under //dgl/graphbolt/ after you installed?

Rhett-Ying · 2024-07-18T05:50:33Z

Is *.post300 a post-release version with additional bug fixes? https://discuss.pytorch.org/t/why-torch-version-returns-2-3-1-post300/206486

Rhett-Ying self-assigned this Jun 13, 2024

Rhett-Ying added the bug:confirmed Something isn't working label Jun 13, 2024

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Failed to import graphbolt due to `libgraphbolt_pytorch_2.3.0.post300.so` #7438

Failed to import graphbolt due to `libgraphbolt_pytorch_2.3.0.post300.so` #7438

Rhett-Ying commented May 30, 2024

alexbarghi-nv commented Jun 6, 2024

Rhett-Ying commented Jun 7, 2024

alexbarghi-nv commented Jun 7, 2024

Davidxswang commented Jun 9, 2024

Rhett-Ying commented Jun 13, 2024

Rhett-Ying commented Jun 13, 2024

Davidxswang commented Jun 13, 2024

Rhett-Ying commented Jun 13, 2024

Davidxswang commented Jun 13, 2024 •

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Silhouettes-of-U commented Jun 14, 2024 •

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rfrs commented Jun 14, 2024

Rhett-Ying commented Jun 14, 2024

Rhett-Ying commented Jun 14, 2024

jbm-composer commented Jun 26, 2024 •

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Livvi commented Jul 8, 2024

Rhett-Ying commented Jul 18, 2024

Rhett-Ying commented Jul 18, 2024

Failed to import graphbolt due to libgraphbolt_pytorch_2.3.0.post300.so #7438

Failed to import graphbolt due to libgraphbolt_pytorch_2.3.0.post300.so #7438

Comments

Rhett-Ying commented May 30, 2024

🐛 Bug

To Reproduce

Expected behavior

Environment

Additional context

alexbarghi-nv commented Jun 6, 2024

Rhett-Ying commented Jun 7, 2024

alexbarghi-nv commented Jun 7, 2024

Davidxswang commented Jun 9, 2024

Rhett-Ying commented Jun 13, 2024

Rhett-Ying commented Jun 13, 2024

Davidxswang commented Jun 13, 2024

Rhett-Ying commented Jun 13, 2024

Davidxswang commented Jun 13, 2024 • edited Loading

Silhouettes-of-U commented Jun 14, 2024 • edited Loading

rfrs commented Jun 14, 2024

Rhett-Ying commented Jun 14, 2024

Rhett-Ying commented Jun 14, 2024

jbm-composer commented Jun 26, 2024 • edited Loading

Livvi commented Jul 8, 2024

Rhett-Ying commented Jul 18, 2024

Rhett-Ying commented Jul 18, 2024

Failed to import graphbolt due to `libgraphbolt_pytorch_2.3.0.post300.so` #7438

Failed to import graphbolt due to `libgraphbolt_pytorch_2.3.0.post300.so` #7438

Davidxswang commented Jun 13, 2024 •

edited

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Silhouettes-of-U commented Jun 14, 2024 •

edited

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jbm-composer commented Jun 26, 2024 •

edited

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