{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":411441817,"defaultBranch":"master","name":"nf-core-fetchngs","ownerLogin":"drpatelh","currentUserCanPush":false,"isFork":true,"isEmpty":false,"createdAt":"2021-09-28T21:20:41.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/23529759?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1708604539.0","currentOid":""},"activityList":{"items":[{"before":"cdc31b97ffaa28948a010fe6857242729a3134f9","after":"755ca355ca166d06550bea3f46a628a84ed409b7","ref":"refs/heads/fixes","pushedAt":"2024-02-29T17:46:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #298 from drpatelh/fixes\n\nexport CONDA_PREFIX into container when using Singularity and Apptainer","shortMessageHtmlLink":"Merge pull request nf-core#298 from drpatelh/fixes"}},{"before":"06494258f6b5d307c5a9c2b43e6f6dc0cec2edb2","after":"cdc31b97ffaa28948a010fe6857242729a3134f9","ref":"refs/heads/fixes","pushedAt":"2024-02-29T12:03:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"03ac573054f55133ecd780a5516bf550dde115b4","after":"06494258f6b5d307c5a9c2b43e6f6dc0cec2edb2","ref":"refs/heads/fixes","pushedAt":"2024-02-29T11:49:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"export CONDA_PREFIX into container when using Singularity and Apptainer","shortMessageHtmlLink":"export CONDA_PREFIX into container when using Singularity and Apptainer"}},{"before":"f6cf223f533e940e55036b70508d82a777c325aa","after":"03ac573054f55133ecd780a5516bf550dde115b4","ref":"refs/heads/fixes","pushedAt":"2024-02-29T10:38:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #296 from drpatelh/fixes\n\nRemove params.outdir from tests where required and update snapshots","shortMessageHtmlLink":"Merge pull request nf-core#296 from drpatelh/fixes"}},{"before":"7a9d81184b8f8cce3843bc0e8605ee62364f6294","after":"f6cf223f533e940e55036b70508d82a777c325aa","ref":"refs/heads/fixes","pushedAt":"2024-02-29T10:31:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Fix nf-tests","shortMessageHtmlLink":"Fix nf-tests"}},{"before":"92cbb7db1454f026e16e45db5fc13121453446e9","after":"7a9d81184b8f8cce3843bc0e8605ee62364f6294","ref":"refs/heads/fixes","pushedAt":"2024-02-29T09:38:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Add Sateesh to contributors for reviews","shortMessageHtmlLink":"Add Sateesh to contributors for reviews"}},{"before":"969fc432cdf9db8dd31f175a393701e2c0ca3090","after":"92cbb7db1454f026e16e45db5fc13121453446e9","ref":"refs/heads/fixes","pushedAt":"2024-02-29T09:37:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Re-install modules and subworkflows from nf-core","shortMessageHtmlLink":"Re-install modules and subworkflows from nf-core"}},{"before":"5b20998323feafb763f458d58e8eadb6d25995bd","after":"969fc432cdf9db8dd31f175a393701e2c0ca3090","ref":"refs/heads/fixes","pushedAt":"2024-02-28T18:04:58.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into fixes","shortMessageHtmlLink":"Merge branch 'dev' into fixes"}},{"before":"502bc7024925e3af1e707b45ab67dd27f5db63a8","after":"5b20998323feafb763f458d58e8eadb6d25995bd","ref":"refs/heads/fixes","pushedAt":"2024-02-28T12:28:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Change outdir path in local subworkflow","shortMessageHtmlLink":"Change outdir path in local subworkflow"}},{"before":"cd8f66db4962555263e7d2b67a12ef7f09e457e7","after":"502bc7024925e3af1e707b45ab67dd27f5db63a8","ref":"refs/heads/fixes","pushedAt":"2024-02-28T12:21:56.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Fix missed tests for nf-core modules","shortMessageHtmlLink":"Fix missed tests for nf-core modules"}},{"before":"f8da74e62842c960969e4cd1cd6d4f328c9d3ae6","after":"cd8f66db4962555263e7d2b67a12ef7f09e457e7","ref":"refs/heads/fixes","pushedAt":"2024-02-28T12:05:50.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Remove --outdir definition in nf-tests for nf-core subworkflows and update snapshots","shortMessageHtmlLink":"Remove --outdir definition in nf-tests for nf-core subworkflows and u…"}},{"before":"41f0a96d670ca8ad87e326a08e684542bb69725a","after":"f8da74e62842c960969e4cd1cd6d4f328c9d3ae6","ref":"refs/heads/fixes","pushedAt":"2024-02-28T11:52:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update snapshots for local modules","shortMessageHtmlLink":"Update snapshots for local modules"}},{"before":"f05b035241d2ff7e07ed90cf252ca4254576de94","after":"41f0a96d670ca8ad87e326a08e684542bb69725a","ref":"refs/heads/fixes","pushedAt":"2024-02-28T11:50:45.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Remove --outdir definition in nf-tests for nf-core/modules and update snapshots","shortMessageHtmlLink":"Remove --outdir definition in nf-tests for nf-core/modules and update…"}},{"before":"b234c7123c9816e248a639a2922556c86f82fd99","after":"f05b035241d2ff7e07ed90cf252ca4254576de94","ref":"refs/heads/fixes","pushedAt":"2024-02-28T11:37:04.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #294 from maxulysse/fetchngs_subway_map\n\nreplace mermaid diagram with subway map","shortMessageHtmlLink":"Merge pull request nf-core#294 from maxulysse/fetchngs_subway_map"}},{"before":"dc7c39da1a75a135884d95bdc53129ceaf130cb5","after":"b234c7123c9816e248a639a2922556c86f82fd99","ref":"refs/heads/fixes","pushedAt":"2024-02-22T17:27:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG.md","shortMessageHtmlLink":"Update CHANGELOG.md"}},{"before":"2263d709ef2579300c3a8d9c9faf1d2645386e70","after":"dc7c39da1a75a135884d95bdc53129ceaf130cb5","ref":"refs/heads/fixes","pushedAt":"2024-02-22T17:24:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #288 from drpatelh/fixes\n\nUpdate Github Action to run full-sized test for all 3 download methods","shortMessageHtmlLink":"Merge pull request nf-core#288 from drpatelh/fixes"}},{"before":"0836b3b7c3dd15662ed3ffd09d73e4b96a28310a","after":"33df093c0acc9efc0a0e5d9871178eb4d91febd5","ref":"refs/heads/synapse","pushedAt":"2024-02-22T15:28:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #290 from drpatelh/synapse\n\nRemove mentions of deprecated Synapse functionality in pipeline","shortMessageHtmlLink":"Merge pull request nf-core#290 from drpatelh/synapse"}},{"before":"68d96f1f28f559ae81858b09834db717d059f676","after":"2263d709ef2579300c3a8d9c9faf1d2645386e70","ref":"refs/heads/fixes","pushedAt":"2024-02-22T14:18:26.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into fixes","shortMessageHtmlLink":"Merge branch 'dev' into fixes"}},{"before":"58cc000570c229ee896a81337ea950ed3b662f4d","after":"0836b3b7c3dd15662ed3ffd09d73e4b96a28310a","ref":"refs/heads/synapse","pushedAt":"2024-02-22T12:26:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"51f60c520be18b838b583676964f5ed9cdd4389d","after":"58cc000570c229ee896a81337ea950ed3b662f4d","ref":"refs/heads/synapse","pushedAt":"2024-02-22T12:25:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Remove mentions of deprecated Synapse functionality in pipeline","shortMessageHtmlLink":"Remove mentions of deprecated Synapse functionality in pipeline"}},{"before":null,"after":"51f60c520be18b838b583676964f5ed9cdd4389d","ref":"refs/heads/synapse","pushedAt":"2024-02-22T12:22:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #278 from nf-core/confirm_pass_fix\n\nconfirm-pass will pass if no tests are triggered","shortMessageHtmlLink":"Merge pull request nf-core#278 from nf-core/confirm_pass_fix"}},{"before":"430c520267cc80ea0b24c9e84f626d4de55ec662","after":"68d96f1f28f559ae81858b09834db717d059f676","ref":"refs/heads/fixes","pushedAt":"2024-02-22T11:45:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Add in missing strategy section","shortMessageHtmlLink":"Add in missing strategy section"}},{"before":"1a8e68293c75f79c7b322b4a78b541d191df53b3","after":"430c520267cc80ea0b24c9e84f626d4de55ec662","ref":"refs/heads/fixes","pushedAt":"2024-02-22T11:42:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"51f60c520be18b838b583676964f5ed9cdd4389d","after":"1a8e68293c75f79c7b322b4a78b541d191df53b3","ref":"refs/heads/fixes","pushedAt":"2024-02-22T11:40:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update Github Action to run full-sized test for all 3 download methods","shortMessageHtmlLink":"Update Github Action to run full-sized test for all 3 download methods"}},{"before":"767c4ec8b89b1942ac4fef6836dde818f3cae3c4","after":"51f60c520be18b838b583676964f5ed9cdd4389d","ref":"refs/heads/fixes","pushedAt":"2024-02-21T12:10:55.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #278 from nf-core/confirm_pass_fix\n\nconfirm-pass will pass if no tests are triggered","shortMessageHtmlLink":"Merge pull request nf-core#278 from nf-core/confirm_pass_fix"}},{"before":"ad811067ef940effb71776bcc49ee2e21776d311","after":"767c4ec8b89b1942ac4fef6836dde818f3cae3c4","ref":"refs/heads/fixes","pushedAt":"2024-02-21T10:48:15.000Z","pushType":"push","commitsCount":10,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #283 from nf-core/nf-core-template-merge-2.13\n\nImportant! Template update for nf-core/tools v2.13","shortMessageHtmlLink":"Merge pull request nf-core#283 from nf-core/nf-core-template-merge-2.13"}},{"before":"9218272a54968a98feff3667058958889bea1dcc","after":"ad811067ef940effb71776bcc49ee2e21776d311","ref":"refs/heads/fixes","pushedAt":"2024-02-20T17:52:06.000Z","pushType":"push","commitsCount":15,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #268 from adamrtalbot/add_flow_diagram\n\nAdd Mermaid diagram","shortMessageHtmlLink":"Merge pull request nf-core#268 from adamrtalbot/add_flow_diagram"}},{"before":"502d58f1d138d8beb318dfddc2bdbf3808d99460","after":"9218272a54968a98feff3667058958889bea1dcc","ref":"refs/heads/fixes","pushedAt":"2024-02-19T18:40:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #279 from drpatelh/fixes\n\nReplace --force_* parameters with --download_method parameter","shortMessageHtmlLink":"Merge pull request nf-core#279 from drpatelh/fixes"}},{"before":"4573cdd502438f63210b710f7ec0ef0d3e0c5d5f","after":"502d58f1d138d8beb318dfddc2bdbf3808d99460","ref":"refs/heads/fixes","pushedAt":"2024-02-19T12:58:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Add deprecated parameter section for --force_sratools_download","shortMessageHtmlLink":"Add deprecated parameter section for --force_sratools_download"}},{"before":"f5579903d8dca7c5ee9925823150e2ab7b1b32b1","after":"4573cdd502438f63210b710f7ec0ef0d3e0c5d5f","ref":"refs/heads/fixes","pushedAt":"2024-02-19T12:11:09.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Use strict validation of parameters since deprecating --force_sratools_download","shortMessageHtmlLink":"Use strict validation of parameters since deprecating --force_sratool…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAECQD2EwA","startCursor":null,"endCursor":null}},"title":"Activity · drpatelh/nf-core-fetchngs"}