{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":288681538,"defaultBranch":"master","name":"nf-core-rnaseq","ownerLogin":"drpatelh","currentUserCanPush":false,"isFork":true,"isEmpty":false,"createdAt":"2020-08-19T08:51:54.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/23529759?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1718883096.0","currentOid":""},"activityList":{"items":[{"before":"2d314bf7bf2886d1613493164c8b62ce0702249b","after":"e7ba0cfaf377e1c7b3b50bcdbaed0e89d8d11734","ref":"refs/heads/updates","pushedAt":"2024-06-28T16:01:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"update snapshot","shortMessageHtmlLink":"update snapshot"}},{"before":"489e7fd343285751450f8ef66f9043ef65433be9","after":"2d314bf7bf2886d1613493164c8b62ce0702249b","ref":"refs/heads/updates","pushedAt":"2024-06-27T16:25:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Fix syntax","shortMessageHtmlLink":"Fix syntax"}},{"before":"0aaf228ece7c91c065df077df8ea23b9c7435ece","after":"489e7fd343285751450f8ef66f9043ef65433be9","ref":"refs/heads/updates","pushedAt":"2024-06-27T15:51:52.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"patch dupradar","shortMessageHtmlLink":"patch dupradar"}},{"before":"6035f5b81435f31fcdc4ff0758736b96f1eed54b","after":"0aaf228ece7c91c065df077df8ea23b9c7435ece","ref":"refs/heads/updates","pushedAt":"2024-06-27T14:39:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update snapshots for default pipeline test","shortMessageHtmlLink":"Update snapshots for default pipeline test"}},{"before":"e640eeaae309bdae813945e0a928913c6df63b27","after":"6035f5b81435f31fcdc4ff0758736b96f1eed54b","ref":"refs/heads/updates","pushedAt":"2024-06-27T12:27:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Rename custom content keys as required in MultiQC v1.22.3","shortMessageHtmlLink":"Rename custom content keys as required in MultiQC v1.22.3"}},{"before":"d338f007384c8cd8e341c75d2e4448f8041c96b0","after":"e640eeaae309bdae813945e0a928913c6df63b27","ref":"refs/heads/updates","pushedAt":"2024-06-27T10:17:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update all nf-core/modules again","shortMessageHtmlLink":"Update all nf-core/modules again"}},{"before":"b8cf404f2a6e0ad61778a2279b72c9f73a38f7f1","after":"d338f007384c8cd8e341c75d2e4448f8041c96b0","ref":"refs/heads/updates","pushedAt":"2024-06-21T08:41:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Revert \"Remove problem multiqc setting\"\n\nThis reverts commit b8cf404f2a6e0ad61778a2279b72c9f73a38f7f1.","shortMessageHtmlLink":"Revert \"Remove problem multiqc setting\""}},{"before":"133334238e04d87c9ea4231d3cf9364a36a88881","after":"b8cf404f2a6e0ad61778a2279b72c9f73a38f7f1","ref":"refs/heads/updates","pushedAt":"2024-06-20T17:43:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Remove problem multiqc setting","shortMessageHtmlLink":"Remove problem multiqc setting"}},{"before":"51939f258eae16197476018b8a28af746f6cd987","after":"133334238e04d87c9ea4231d3cf9364a36a88881","ref":"refs/heads/updates","pushedAt":"2024-06-20T17:19:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update snapshots for prepare_genome subworkflow","shortMessageHtmlLink":"Update snapshots for prepare_genome subworkflow"}},{"before":"8acf634c5745fe78a5c688787547d27692dfffed","after":"51939f258eae16197476018b8a28af746f6cd987","ref":"refs/heads/updates","pushedAt":"2024-06-20T15:58:03.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"c5b4feec02194e07c7b2509cbb309c386b7d13d0","after":"8acf634c5745fe78a5c688787547d27692dfffed","ref":"refs/heads/updates","pushedAt":"2024-06-20T15:50:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update all nf-core modules and subworkflows","shortMessageHtmlLink":"Update all nf-core modules and subworkflows"}},{"before":"9dbdd2c16b524a83efc54d020c3fdf9ed6b9a117","after":"c5b4feec02194e07c7b2509cbb309c386b7d13d0","ref":"refs/heads/updates","pushedAt":"2024-06-20T15:13:30.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1328 from adamrtalbot/alternative_aligners_nf-test\n\nAdd nf-test for STAR-RSEM and HISAT2 aligners","shortMessageHtmlLink":"Merge pull request nf-core#1328 from adamrtalbot/alternative_aligners…"}},{"before":"178c45a9c06cf12a123b1f4461ef81b175e95b86","after":"9dbdd2c16b524a83efc54d020c3fdf9ed6b9a117","ref":"refs/heads/updates","pushedAt":"2024-06-20T13:34:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"579684abd58e76a602c8337ce356d7c26b49284f","after":"178c45a9c06cf12a123b1f4461ef81b175e95b86","ref":"refs/heads/updates","pushedAt":"2024-06-20T13:27:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Remove tags from all nf-test files","shortMessageHtmlLink":"Remove tags from all nf-test files"}},{"before":"aae65875d3162b3ed18cde7c5c7196acf9ac3eea","after":"579684abd58e76a602c8337ce356d7c26b49284f","ref":"refs/heads/updates","pushedAt":"2024-06-20T13:26:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1324 from drpatelh/updates\n\nFix tags entries and rename pipeline level tests","shortMessageHtmlLink":"Merge pull request nf-core#1324 from drpatelh/updates"}},{"before":"100ae0a839fdd300f31d0a12b20e835dc67b0861","after":"aae65875d3162b3ed18cde7c5c7196acf9ac3eea","ref":"refs/heads/updates","pushedAt":"2024-06-20T13:20:27.000Z","pushType":"push","commitsCount":12,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into updates","shortMessageHtmlLink":"Merge branch 'dev' into updates"}},{"before":"7e6827e420585f59edf1e22c02b440f51c8eec61","after":"928a30ef714a3d073ede26943d69b347c65b3bd2","ref":"refs/heads/local_envs","pushedAt":"2024-06-20T11:34:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"bd64ab6d20fd0347cf396876f5224320d3ac238c","after":"7e6827e420585f59edf1e22c02b440f51c8eec61","ref":"refs/heads/local_envs","pushedAt":"2024-06-20T11:32:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Move Conda dependencies for local modules to individual environment file","shortMessageHtmlLink":"Move Conda dependencies for local modules to individual environment file"}},{"before":null,"after":"bd64ab6d20fd0347cf396876f5224320d3ac238c","ref":"refs/heads/local_envs","pushedAt":"2024-06-20T11:31:36.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1306 from nf-core/improve_rseqc_strandedness\n\nOverhaul strandedness detection / comparison","shortMessageHtmlLink":"Merge pull request nf-core#1306 from nf-core/improve_rseqc_strandedness"}},{"before":"1cf2d14154ae3b951fce459d182a0503f014423e","after":"100ae0a839fdd300f31d0a12b20e835dc67b0861","ref":"refs/heads/updates","pushedAt":"2024-06-20T11:06:47.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Rename pipeline level tests","shortMessageHtmlLink":"Rename pipeline level tests"}},{"before":"bcbfe370275c603d7e71a45fd30eff684046d7f6","after":"1cf2d14154ae3b951fce459d182a0503f014423e","ref":"refs/heads/updates","pushedAt":"2024-06-20T08:14:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"302e456090fe3d1f479607493855c79348f3ecbc","after":"bcbfe370275c603d7e71a45fd30eff684046d7f6","ref":"refs/heads/updates","pushedAt":"2024-06-19T20:32:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Fix prettier","shortMessageHtmlLink":"Fix prettier"}},{"before":"816bbde55504e422eaa2af2ca7b351be509ba8f2","after":"302e456090fe3d1f479607493855c79348f3ecbc","ref":"refs/heads/updates","pushedAt":"2024-06-19T20:23:37.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Fix syntax consistency","shortMessageHtmlLink":"Fix syntax consistency"}},{"before":"bd64ab6d20fd0347cf396876f5224320d3ac238c","after":"816bbde55504e422eaa2af2ca7b351be509ba8f2","ref":"refs/heads/updates","pushedAt":"2024-06-19T20:01:53.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Rename pipeline level tests","shortMessageHtmlLink":"Rename pipeline level tests"}},{"before":null,"after":"bd64ab6d20fd0347cf396876f5224320d3ac238c","ref":"refs/heads/updates","pushedAt":"2024-06-19T19:03:53.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1306 from nf-core/improve_rseqc_strandedness\n\nOverhaul strandedness detection / comparison","shortMessageHtmlLink":"Merge pull request nf-core#1306 from nf-core/improve_rseqc_strandedness"}},{"before":"485f660e3032581eb051fbd051a07626f865a8de","after":"f6d93dd07dedeae4beec02ab3205b2f09461ff36","ref":"refs/heads/fixes","pushedAt":"2024-06-19T18:59:48.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"f8a9e27935d2a63697d67f6915c990dd0e100e6b","after":"485f660e3032581eb051fbd051a07626f865a8de","ref":"refs/heads/fixes","pushedAt":"2024-06-19T09:19:33.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1321 from nf-core/remove-additional-ci-triggers\n\nRemove push and release triggers from CI","shortMessageHtmlLink":"Merge pull request nf-core#1321 from nf-core/remove-additional-ci-tri…"}},{"before":"e0b41b41ebeced5d28d12882359e320bf371c5a7","after":"f8a9e27935d2a63697d67f6915c990dd0e100e6b","ref":"refs/heads/fixes","pushedAt":"2024-06-19T08:52:28.000Z","pushType":"push","commitsCount":34,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1307 from maxulysse/subway_map_again\n\nClarify infer strandedness step in subway map and text","shortMessageHtmlLink":"Merge pull request nf-core#1307 from maxulysse/subway_map_again"}},{"before":"431edb0c5698188d9a86e5d47d8b6dc07487d767","after":"e0b41b41ebeced5d28d12882359e320bf371c5a7","ref":"refs/heads/fixes","pushedAt":"2024-05-20T09:30:40.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1302 from nf-core/tximport_fix_missing_files\n\nAdd missing files from Tximport processing","shortMessageHtmlLink":"Merge pull request nf-core#1302 from nf-core/tximport_fix_missing_files"}},{"before":"14fa85356dacaeea08a055aad1f49a6d36c9c86f","after":"431edb0c5698188d9a86e5d47d8b6dc07487d767","ref":"refs/heads/fixes","pushedAt":"2024-05-15T13:31:27.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"drpatelh","name":"Harshil Patel","path":"/drpatelh","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23529759?s=80&v=4"},"commit":{"message":"Merge pull request #1297 from nf-core/nf-core-template-merge-2.14.1\n\nImportant! Template update for nf-core/tools v2.14.1","shortMessageHtmlLink":"Merge pull request nf-core#1297 from nf-core/nf-core-template-merge-2…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEcggTnAA","startCursor":null,"endCursor":null}},"title":"Activity · drpatelh/nf-core-rnaseq"}