diff --git a/.github/workflows/deploy.yaml b/.github/workflows/deploy.yaml
new file mode 100644
index 0000000..5e0f76e
--- /dev/null
+++ b/.github/workflows/deploy.yaml
@@ -0,0 +1,50 @@
+name: Docs
+
+permissions:
+  contents: write
+  pages: write
+
+on:
+  push:
+    branches: [ "main", "master" ]
+  workflow_dispatch:
+
+jobs:
+  deploy:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Activate conda env with environment.yml
+        uses: mamba-org/setup-micromamba@v1
+        with:
+          environment-file: environment.yml
+          cache-environment: true
+          post-cleanup: 'all'
+
+      - name: Install nbdev
+        shell: bash -l {0}
+        run: |
+          pip install -U nbdev
+
+      - name: Doing editable install
+        shell: bash -l {0}
+        run: |
+          test -f setup.py && pip install -e ".[dev]"
+
+      - name: Run nbdev_docs
+        shell: bash -l {0}
+        run: |
+          nbdev_docs
+
+      - name: Deploy to GitHub Pages
+        uses: peaceiris/actions-gh-pages@v3
+        with:
+          github_token: ${{ github.token }}
+          force_orphan: true
+          publish_dir: ./_docs
+          # The following lines assign commit authorship to the official GH-Actions bot for deploys to `gh-pages` branch.
+          # You can swap them out with your own user credentials.
+          user_name: github-actions[bot]
+          user_email: 41898282+github-actions[bot]@users.noreply.github.com
diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml
new file mode 100644
index 0000000..d64403d
--- /dev/null
+++ b/.github/workflows/test.yaml
@@ -0,0 +1,63 @@
+name: CI
+on:  [workflow_dispatch, pull_request, push]
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Activate conda env with environment.yml
+        uses: mamba-org/setup-micromamba@v1
+        with:
+          environment-file: environment.yml
+          cache-environment: true
+          post-cleanup: 'all'
+
+      - name: Install nbdev
+        shell: bash -l {0}
+        run: |
+          pip install -U nbdev
+
+      - name: Doing editable install
+        shell: bash -l {0}
+        run: |
+          test -f setup.py && pip install -e ".[dev]"
+
+      - name: Check we are starting with clean git checkout
+        shell: bash -l {0}
+        run: |
+          if [[ `git status --porcelain -uno` ]]; then
+            git diff
+            echo "git status is not clean"
+            false
+          fi
+
+      - name: Trying to strip out notebooks
+        shell: bash -l {0}
+        run: |
+          nbdev_clean
+          git status -s # display the status to see which nbs need cleaning up
+          if [[ `git status --porcelain -uno` ]]; then
+            git status -uno
+            echo -e "!!! Detected unstripped out notebooks\n!!!Remember to run nbdev_install_hooks"
+            echo -e "This error can also happen if you are using an older version of nbdev relative to what is in CI.  Please try to upgrade nbdev with the command `pip install -U nbdev`"
+            false
+          fi
+
+      - name: Run nbdev_export
+        shell: bash -l {0}
+        run: |
+          nbdev_export
+          if [[ `git status --porcelain -uno` ]]; then
+            echo "::error::Notebooks and library are not in sync.  Please run nbdev_export."
+            git status -uno
+            git diff
+            exit 1;
+          fi
+
+      - name: Run nbdev_test
+        shell: bash -l {0}
+        run: |
+          nbdev_test
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..5f112e2
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,151 @@
+_docs/
+_proc/
+
+*.bak
+.gitattributes
+.last_checked
+.gitconfig
+*.bak
+*.log
+*~
+~*
+_tmp*
+tmp*
+tags
+*.pkg
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+env/
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+.hypothesis/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# pyenv
+.python-version
+
+# celery beat schedule file
+celerybeat-schedule
+
+# SageMath parsed files
+*.sage.py
+
+# dotenv
+.env
+
+# virtualenv
+.venv
+venv/
+ENV/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+
+.vscode
+*.swp
+
+# osx generated files
+.DS_Store
+.DS_Store?
+.Trashes
+ehthumbs.db
+Thumbs.db
+.idea
+
+# pytest
+.pytest_cache
+
+# tools/trust-doc-nbs
+docs_src/.last_checked
+
+# symlinks to fastai
+docs_src/fastai
+tools/fastai
+
+# link checker
+checklink/cookies.txt
+
+# .gitconfig is now autogenerated
+.gitconfig
+
+# Quarto installer
+.deb
+.pkg
+
+# Quarto
+.quarto
diff --git a/LICENSE b/LICENSE
new file mode 100644
index 0000000..36774ed
--- /dev/null
+++ b/LICENSE
@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2023 Vivek Gopalakrishnan
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
\ No newline at end of file
diff --git a/MANIFEST.in b/MANIFEST.in
new file mode 100644
index 0000000..5c0e7ce
--- /dev/null
+++ b/MANIFEST.in
@@ -0,0 +1,5 @@
+include settings.ini
+include LICENSE
+include CONTRIBUTING.md
+include README.md
+recursive-exclude * __pycache__
diff --git a/README.md b/README.md
new file mode 100644
index 0000000..4da88e2
--- /dev/null
+++ b/README.md
@@ -0,0 +1,23 @@
+DiffPose
+================
+
+<!-- WARNING: THIS FILE WAS AUTOGENERATED! DO NOT EDIT! -->
+
+This file will become your README and also the index of your
+documentation.
+
+## Install
+
+``` sh
+pip install DiffPose
+```
+
+## How to use
+
+Fill me in please! Don’t forget code examples:
+
+``` python
+1+1
+```
+
+    2
diff --git a/diffpose/__init__.py b/diffpose/__init__.py
new file mode 100644
index 0000000..f102a9c
--- /dev/null
+++ b/diffpose/__init__.py
@@ -0,0 +1 @@
+__version__ = "0.0.1"
diff --git a/diffpose/_modidx.py b/diffpose/_modidx.py
new file mode 100644
index 0000000..9a18042
--- /dev/null
+++ b/diffpose/_modidx.py
@@ -0,0 +1,8 @@
+# Autogenerated by nbdev
+
+d = { 'settings': { 'branch': 'main',
+                'doc_baseurl': '/DiffPose',
+                'doc_host': 'https://vivekg.dev',
+                'git_url': 'https://github.com/eigenvivek/DiffPose',
+                'lib_path': 'diffpose'},
+  'syms': {}}
diff --git a/notebooks/_quarto.yml b/notebooks/_quarto.yml
new file mode 100644
index 0000000..0a6dfcb
--- /dev/null
+++ b/notebooks/_quarto.yml
@@ -0,0 +1,20 @@
+project:
+  type: website
+
+format:
+  html:
+    theme: cosmo
+    css: styles.css
+    toc: true
+
+website:
+  twitter-card: true
+  open-graph: true
+  repo-actions: [issue]
+  navbar:
+    background: primary
+    search: true
+  sidebar:
+    style: floating
+
+metadata-files: [nbdev.yml, sidebar.yml]
\ No newline at end of file
diff --git a/notebooks/index.ipynb b/notebooks/index.ipynb
new file mode 100644
index 0000000..b30d714
--- /dev/null
+++ b/notebooks/index.ipynb
@@ -0,0 +1,86 @@
+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "# DiffPose\n",
+    "\n",
+    "> Patient-specific intraoperative 2D/3D registration via differentiable rendering"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "This file will become your README and also the index of your documentation."
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## Install"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "```sh\n",
+    "pip install DiffPose\n",
+    "```"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## How to use"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Fill me in please! Don't forget code examples:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "2"
+      ]
+     },
+     "execution_count": null,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "1+1"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "python3",
+   "language": "python",
+   "name": "python3"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 4
+}
diff --git a/notebooks/nbdev.yml b/notebooks/nbdev.yml
new file mode 100644
index 0000000..dc6c5f2
--- /dev/null
+++ b/notebooks/nbdev.yml
@@ -0,0 +1,9 @@
+project:
+  output-dir: _docs
+
+website:
+  title: "diffpose"
+  site-url: "https://vivekg.dev/DiffPose"
+  description: "Patient-specific intraoperative 2D/3D registration via differentiable rendering"
+  repo-branch: main
+  repo-url: "https://github.com/eigenvivek/DiffPose"
diff --git a/notebooks/styles.css b/notebooks/styles.css
new file mode 100644
index 0000000..66ccc49
--- /dev/null
+++ b/notebooks/styles.css
@@ -0,0 +1,37 @@
+.cell {
+  margin-bottom: 1rem;
+}
+
+.cell > .sourceCode {
+  margin-bottom: 0;
+}
+
+.cell-output > pre {
+  margin-bottom: 0;
+}
+
+.cell-output > pre, .cell-output > .sourceCode > pre, .cell-output-stdout > pre {
+  margin-left: 0.8rem;
+  margin-top: 0;
+  background: none;
+  border-left: 2px solid lightsalmon;
+  border-top-left-radius: 0;
+  border-top-right-radius: 0;
+}
+
+.cell-output > .sourceCode {
+  border: none;
+}
+
+.cell-output > .sourceCode {
+  background: none;
+  margin-top: 0;
+}
+
+div.description {
+  padding-left: 2px;
+  padding-top: 5px;
+  font-style: italic;
+  font-size: 135%;
+  opacity: 70%;
+}
diff --git a/settings.ini b/settings.ini
new file mode 100644
index 0000000..e9b35ed
--- /dev/null
+++ b/settings.ini
@@ -0,0 +1,44 @@
+[DEFAULT]
+# All sections below are required unless otherwise specified.
+# See https://github.com/fastai/nbdev/blob/master/settings.ini for examples.
+
+### Python library ###
+repo = DiffPose
+lib_name = diffpose
+version = 0.0.1
+min_python = 3.7
+license = mit
+black_formatting = True
+
+### nbdev ###
+doc_path = _docs
+lib_path = diffpose
+nbs_path = notebooks
+recursive = True
+tst_flags = notest
+put_version_in_init = True
+
+### Docs ###
+branch = main
+custom_sidebar = False
+doc_host = https://vivekg.dev
+doc_baseurl = /DiffPose
+git_url = https://github.com/eigenvivek/DiffPose
+title = diffpose
+readme_nb = index.ipynb
+
+### PyPI ###
+audience = Developers
+author = Vivek Gopalakrihsnan
+author_email = vivekg@mit.edu
+copyright = 2023 onwards, Vivek Gopalakrishnan
+description = Patient-specific intraoperative 2D/3D registration via differentiable rendering
+keywords = nbdev jupyter notebook python
+language = English
+status = 3
+user = eigenvivek
+
+### Optional ###
+# requirements = fastcore pandas
+# dev_requirements = 
+# console_scripts =
\ No newline at end of file
diff --git a/setup.py b/setup.py
new file mode 100644
index 0000000..e3281ae
--- /dev/null
+++ b/setup.py
@@ -0,0 +1,57 @@
+from pkg_resources import parse_version
+from configparser import ConfigParser
+import setuptools, shlex
+assert parse_version(setuptools.__version__)>=parse_version('36.2')
+
+# note: all settings are in settings.ini; edit there, not here
+config = ConfigParser(delimiters=['='])
+config.read('settings.ini', encoding='utf-8')
+cfg = config['DEFAULT']
+
+cfg_keys = 'version description keywords author author_email'.split()
+expected = cfg_keys + "lib_name user branch license status min_python audience language".split()
+for o in expected: assert o in cfg, "missing expected setting: {}".format(o)
+setup_cfg = {o:cfg[o] for o in cfg_keys}
+
+licenses = {
+    'apache2': ('Apache Software License 2.0','OSI Approved :: Apache Software License'),
+    'mit': ('MIT License', 'OSI Approved :: MIT License'),
+    'gpl2': ('GNU General Public License v2', 'OSI Approved :: GNU General Public License v2 (GPLv2)'),
+    'gpl3': ('GNU General Public License v3', 'OSI Approved :: GNU General Public License v3 (GPLv3)'),
+    'bsd3': ('BSD License', 'OSI Approved :: BSD License'),
+}
+statuses = [ '1 - Planning', '2 - Pre-Alpha', '3 - Alpha',
+    '4 - Beta', '5 - Production/Stable', '6 - Mature', '7 - Inactive' ]
+py_versions = '3.6 3.7 3.8 3.9 3.10'.split()
+
+requirements = shlex.split(cfg.get('requirements', ''))
+if cfg.get('pip_requirements'): requirements += shlex.split(cfg.get('pip_requirements', ''))
+min_python = cfg['min_python']
+lic = licenses.get(cfg['license'].lower(), (cfg['license'], None))
+dev_requirements = (cfg.get('dev_requirements') or '').split()
+
+setuptools.setup(
+    name = cfg['lib_name'],
+    license = lic[0],
+    classifiers = [
+        'Development Status :: ' + statuses[int(cfg['status'])],
+        'Intended Audience :: ' + cfg['audience'].title(),
+        'Natural Language :: ' + cfg['language'].title(),
+    ] + ['Programming Language :: Python :: '+o for o in py_versions[py_versions.index(min_python):]] + (['License :: ' + lic[1] ] if lic[1] else []),
+    url = cfg['git_url'],
+    packages = setuptools.find_packages(),
+    include_package_data = True,
+    install_requires = requirements,
+    extras_require={ 'dev': dev_requirements },
+    dependency_links = cfg.get('dep_links','').split(),
+    python_requires  = '>=' + cfg['min_python'],
+    long_description = open('README.md', encoding='utf-8').read(),
+    long_description_content_type = 'text/markdown',
+    zip_safe = False,
+    entry_points = {
+        'console_scripts': cfg.get('console_scripts','').split(),
+        'nbdev': [f'{cfg.get("lib_path")}={cfg.get("lib_path")}._modidx:d']
+    },
+    **setup_cfg)
+
+