analysis.rb

class Analysis < Formula
  homepage "https://github.com/molpopgen/analysis"
  url "https://github.com/molpopgen/analysis/archive/0.8.7.tar.gz"
  sha256 "3af7ce89358376d3d27ee97b518735ddddc7a5cb6e0b340833c8e1a44fdb34be"

  bottle do
    root_url "https://homebrew.bintray.com/bottles-science"
    cellar :any
    sha256 "40055b7f5992ceb0e82ebbb416c0ef9ed4ddadc128df8230edcf012242059c6b" => :yosemite
    sha256 "67b41c0f0a5ff58e4a7e56c5656bbb6daff0819e27218e3a214245f74fff502c" => :mavericks
    sha256 "5fc72ebd81ba0027610720a264ff3aba6613e10fe2de905b74b9c46c32649c55" => :mountain_lion
  end

  depends_on "gsl"
  depends_on "libsequence"

  # add missing include
  # https://github.com/molpopgen/analysis/pull/3
  patch do
    url "https://github.com/tdsmith/molpopgen-analysis/commit/01c796d.diff"
    sha256 "abaefd36f108f1981e28d874e4cd78ca961d07841e69b4af607d0585354c72d5"
  end

  needs :cxx11

  def install
    ENV.cxx11
    system "./configure", "--prefix=#{prefix}"
    system "make"
    system "make", "install"
  end

  test do
    assert shell_output("#{bin}/gestimator 2>&1", 1).include? "gestimator"
  end
end