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# if you do not habe BLAST+ installed run:
$ sudo apt-get install ncbi-blast+
# go to the place where Uniref fasta file is being stored (change the path bellow accordingly):
$ cd /Place/where/UnirefX.fasta/file/is/stored
# create database (this might take a while from several minutes to one hour)
$ makeblastdb -dbtype prot -in uniref50.fasta
There is an official docker for ncbi-blast, maybe you can just do it with it. Can be either docker command or cwl-task
The text was updated successfully, but these errors were encountered:
We could add this and also options for updating the databases (uniref updates every 3 months). Also, I still need to check whether the predictors behaviour is consistent with different versions of protein databases...
You have:
There is an official docker for ncbi-blast, maybe you can just do it with it. Can be either docker command or cwl-task
The text was updated successfully, but these errors were encountered: