From 391fd82b9bd4aba49affe956b82f44c30364daaf Mon Sep 17 00:00:00 2001 From: Ethan Bass Date: Wed, 15 Nov 2023 10:55:26 -0500 Subject: [PATCH] Update README.md --- README.md | 11 ++++------- 1 file changed, 4 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index 00c6cb9..aa51f72 100644 --- a/README.md +++ b/README.md @@ -4,13 +4,11 @@ [![stability-experimental](https://img.shields.io/badge/stability-experimental-orange.svg)](https://github.com/emersion/stability-badges#experimental) -A few functions for analyzing [MS-DIAL](http://prime.psc.riken.jp/compms/msdial/main.html) alignments in R. - -**Note**: This package is not created or endorsed by the creators of MS-DIAL. +A few functions for analyzing mass spectrometry alignments in R. Currently, MS-DIAL `.txt` alignment files are supported. ### Installation -Currently it's recommended to install mzinspectr directly from GitHub. +It's recommended to install mzinspectr directly from GitHub. ``` install.packages("devtools") @@ -23,10 +21,9 @@ It can also be installed via [R Universe](https://ethanbass.r-universe.dev/): install.packages("mzinspectr", repos="https://ethanbass.r-universe.dev/", type="source") ``` +### Exporting alignments from MS-DIAL. -### Exporting your alignment - -Export your alignment from MS-DIAL by selecting the `Export:Alignment Result` menu. +Export your alignment from MS-DIAL by selecting the `Export:Alignment Result` menu. Select Area or Height as appropriate. ### Reading alignment into R